RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 KCNJ6P48051 423 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 NFX1Q12986 1120 aaKnown RBP9.78□□□□□ -0.84
CKAP2-201ENST00000258607 PDCLQ13371 301 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 WDR72Q3MJ13 1102 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 ZNF568Q3ZCX4 644 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 MMS22LQ6ZRQ5 1243 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 GSTA5Q7RTV2 222 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 EMC1Q8N766 993 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 ALG3Q92685 438 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 MAGOHBQ96A72 148 aaKnown RBP9.78□□□□□ -0.84
CKAP2-201ENST00000258607 ZWILCHQ9H900 591 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 PPANQ9NQ55 473 aaKnown RBP9.78□□□□□ -0.84
CKAP2-201ENST00000258607 TJP2Q9UDY2 1190 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 GON4LQ3T8J9 2241 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-201ENST00000258607 KIF4AO95239 1232 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 TMEM191BP0C7N4 346 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 CXCL8P10145 99 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 KCNA2P16389 499 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 COMTP21964 271 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 RRM1P23921 792 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 CYP2C19P33261 490 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 RGS7P49802 495 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 ALDH5A1P51649 535 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-201ENST00000258607 BEX3Q00994 111 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 PPP1R7Q15435 360 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 BRDTQ58F21 947 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-201ENST00000258607 CFAP58Q5T655 872 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 EEF1DP3Q658K8 133 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 SLC39A4Q6P5W5 647 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 AGPAT1Q99943 283 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 ERVK-5Q9HDB9 667 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 OLFML3Q9NRN5 406 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 RAB20Q9NX57 234 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 ASIC3Q9UHC3 531 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 ALG6Q9Y672 507 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 SDK1Q7Z5N4 2213 aa9.78□□□□□ -0.84
CKAP2-201ENST00000258607 CELF2O95319 508 aaKnown RBP9.77□□□□□ -0.84
CKAP2-201ENST00000258607 TCP1P17987 556 aaKnown RBP9.77□□□□□ -0.84
CKAP2-201ENST00000258607 ATP4AP20648 1035 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 IFNAR2P48551 515 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 NRLP54845 237 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 NAB2Q15742 525 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 UBAP2Q5T6F2 1119 aaKnown RBP9.77□□□□□ -0.84
CKAP2-201ENST00000258607 EFCAB12Q6NXP0 572 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 SCYL2Q6P3W7 929 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 INTS8Q75QN2 995 aaKnown RBP9.77□□□□□ -0.84
CKAP2-201ENST00000258607 FBXL13Q8NEE6 735 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 PAIP2Q9BPZ3 127 aaKnown RBP9.77□□□□□ -0.84
CKAP2-201ENST00000258607 RRAGCQ9HB90 399 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 FAM49BQ9NUQ9 324 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 POLIQ9UNA4 740 aa9.77□□□□□ -0.84
CKAP2-201ENST00000258607 DOCK5Q9H7D0 1870 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 A0A087WZ62 844 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 CCL15-CCL14A0A0B4J2E2 113 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 ACSL3O95573 720 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 FERP16591 822 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 GLRA2P23416 452 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 MYL6P60660 151 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 FKBP1AP62942 108 aaKnown RBP9.77□□□□□ -0.85
CKAP2-201ENST00000258607 CCL15Q16663 113 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 HYIQ5T013 277 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 DCUN1D2Q6PH85 259 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 EPM2AIP1Q7L775 607 aaPredicted RBP9.77□□□□□ -0.85
CKAP2-201ENST00000258607 GPC2Q8N158 579 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 RNPC3Q96LT9 517 aaKnown RBP9.77□□□□□ -0.85
CKAP2-201ENST00000258607 SELENOSQ9BQE4 189 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 FDXACB1Q9BRP7 624 aaPredicted RBP9.77□□□□□ -0.85
CKAP2-201ENST00000258607 IMPG2Q9BZV3 1241 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 STIM2Q9P246 746 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 MORC2Q9Y6X9 1032 aaPredicted RBP9.77□□□□□ -0.85
CKAP2-201ENST00000258607 GOLGA6CA6NDK9 693 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 HCRTO43612 131 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 GOLGA6DP0CG33 693 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 KRT39Q6A163 491 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 PPP4R3CPQ6ZMV5 832 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 UBA3Q8TBC4 463 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 PARD3BQ8TEW8 1205 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 TMEM206Q9H813 350 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 SETD4Q9NVD3 440 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 GOLGA6AQ9NYA3 693 aa9.77□□□□□ -0.85
CKAP2-201ENST00000258607 MCM3APO60318 1980 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 OATP04181 439 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 CTNNA2P26232 953 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 MAPK4P31152 587 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 JAK3P52333 1124 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 ORC2Q13416 577 aaPredicted RBP9.76□□□□□ -0.85
CKAP2-201ENST00000258607 CYP4F22Q6NT55 531 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 C10orf67Q8IYJ2 551 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.76□□□□□ -0.85
CKAP2-201ENST00000258607 CASKIN2Q8WXE0 1202 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 MBOAT7Q96N66 472 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 MINDY3Q9H8M7 445 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 SUCLA2Q9P2R7 463 aaPredicted RBP9.76□□□□□ -0.85
CKAP2-201ENST00000258607 GGT7Q9UJ14 662 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 L1RE1Q9UN81 338 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 HSF2BPO75031 334 aa9.76□□□□□ -0.85
CKAP2-201ENST00000258607 SUPT20HL2P0C7V6 817 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms