RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SYTL5Q8TDW5 730 aaPredicted RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 ASIC4Q96FT7 647 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 DDX23Q9BUQ8 820 aaKnown RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 CNTNAP2Q9UHC6 1331 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 ZMYM5Q9UJ78 669 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 AGAP1Q9UPQ3 857 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 NCAM2O15394 837 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 TMCC1O94876 653 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 CDC27P30260 824 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 SLC1A1P43005 524 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 NLRP11P59045 1033 aaKnown RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 TOB2Q14106 344 aaPredicted RBP14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 SCARA5Q6ZMJ2 495 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 NUDCD1Q96RS6 583 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 RIOX1Q9H6W3 641 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
PRPF38A-201ENST00000257181 CNTNAP5Q8WYK1 1306 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 POTEMA6NI47 508 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 OGTO15294 1046 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 PQBP1O60828 265 aaKnown RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 PHEXP78562 749 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 UAP1Q16222 522 aaPredicted RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 SCFD1Q8WVM8 642 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 TRIM54Q9BYV2 358 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 STARD3Q14849 445 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 IQCB1Q15051 598 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 ACSF2Q96CM8 615 aaPredicted RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 DOLKQ9UPQ8 538 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 ZBED1O96006 694 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 F9P00740 461 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 GNA15P30679 374 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 SHMT1P34896 483 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 TMED2Q15363 201 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 DARS2Q6PI48 645 aaKnown RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 SMIM5Q71RC9 77 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 SKA2Q8WVK7 121 aaPredicted RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 RIN2Q8WYP3 895 aaPredicted RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 KLRG1Q96E93 195 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 BPIFA3Q9BQP9 254 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 MFSD1Q9H3U5 465 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 E9PMD0 336 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 CPP00450 1065 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 LAG3P18627 525 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 ZNF235Q14590 738 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 HHATQ5VTY9 493 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 UBLCP1Q8WVY7 318 aaPredicted RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 XPO6Q96QU8 1125 aaKnown RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 PAIP2Q9BPZ3 127 aaKnown RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 TRPC7Q9HCX4 862 aa14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
PRPF38A-201ENST00000257181 TMCO4Q5TGY1 634 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 SDCCAG8Q86SQ7 713 aaPredicted RBP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 ARHGAP24Q8N264 748 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 VPS37BQ9H9H4 285 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 PARVAQ9NVD7 372 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 RPTORQ8N122 1335 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 RALBP11234 206 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 CAV1Q03135 178 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 TMC7Q7Z402 723 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 DDX53Q86TM3 631 aaKnown RBP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 ATL2Q8NHH9 583 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 AGO4Q9HCK5 861 aaKnown RBP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 ITGA11Q9UKX5 1188 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 DDTLA6NHG4 134 aaPredicted RBP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 ZNF197O14709 1029 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 TDP2O95551 362 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 PMLP29590 882 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 MGAT5BQ3V5L5 792 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 SLC25A13Q9UJS0 675 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.122e-19■■■■■ 33.8
PRPF38A-201ENST00000257181 ZNF135P52742 658 aaPredicted RBP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 CASP7P55210 303 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 DSG4Q86SJ6 1040 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 CENPKQ9BS16 269 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 INTS2Q9H0H0 1204 aaKnown RBP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 PLEKHA5Q9HAU0 1116 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 DNAJC12Q9UKB3 198 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 FBXL21Q9UKT6 434 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 SAR1BQ9Y6B6 198 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 KRIT1O00522 736 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 RWDD2BP57060 319 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 PGM5Q15124 567 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 AAK1Q2M2I8 961 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 PLPPR4Q7Z2D5 763 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 TMEM86AQ8N2M4 240 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 IFT81Q8WYA0 676 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 FBXO44Q9H4M3 255 aa14.28□□□□□ -0.12
PRPF38A-201ENST00000257181 POTEFA5A3E0 1075 aa14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 GOLGA8IPA6NC78 632 aa14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 FAM200BP0CF97 657 aa14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 POTEIP0CG38 1075 aa14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 POTEGQ6S5H5 508 aa14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 POTEEQ6S8J3 1075 aa14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 FBXO16Q8IX29 292 aaPredicted RBP14.27□□□□□ -0.12
PRPF38A-201ENST00000257181 REPS2Q8NFH8 660 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms