RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 ASAP2O43150 1006 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 NPTXRO95502 500 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
NIP7-201ENST00000254940 ADSSP30520 456 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 KNOP1Q1ED39 458 aaKnown RBP13.17□□□□□ -0.3
NIP7-201ENST00000254940 BADQ92934 168 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 LPPQ93052 612 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
NIP7-201ENST00000254940 STRA6Q9BX79 667 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 SEL1LQ9UBV2 794 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 TRIP11Q15643 1979 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 MROH7Q68CQ1 1323 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 TNFSF9P41273 254 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 PAK2Q13177 524 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 PSMD2Q13200 908 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 ADAM9Q13443 819 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 ATF7IP2Q5U623 682 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 TRIM65Q6PJ69 517 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 WDR59Q6PJI9 974 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 NME8Q8N427 588 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 CCDC112Q8NEF3 446 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 DBF4BQ8NFT6 615 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 WDR24Q96S15 920 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
NIP7-201ENST00000254940 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
NIP7-201ENST00000254940 AKAP3O75969 853 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
NIP7-201ENST00000254940 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
NIP7-201ENST00000254940 BFSP2Q13515 415 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 COBLL1Q53SF7 1204 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 TWF2Q6IBS0 349 aaKnown RBP13.16□□□□□ -0.3
NIP7-201ENST00000254940 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 MYRIPQ8NFW9 859 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 PANX2Q96RD6 677 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 MMRN2Q9H8L6 949 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 KLK14Q9P0G3 267 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 TRIM10Q9UDY6 481 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
NIP7-201ENST00000254940 NR2F2P24468 414 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 AKAP5P24588 427 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 LMBRD2Q68DH5 695 aaPredicted RBP13.15□□□□□ -0.3
NIP7-201ENST00000254940 MAP4K3Q8IVH8 894 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
NIP7-201ENST00000254940 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 GBP3Q9H0R5 595 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 FZD8Q9H461 694 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 C17orf75Q9HAS0 396 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 ITIH6Q6UXX5 1313 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 ACKR2O00590 384 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 NRDCO43847 1150 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 EPHB4P54760 987 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 WNT7BP56706 349 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
NIP7-201ENST00000254940 LRRC63Q05C16 580 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 OTOP2Q7RTS6 562 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 TOX2Q96NM4 488 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 MRPL4Q9BYD3 311 aaKnown RBP13.15□□□□□ -0.3
NIP7-201ENST00000254940 TTYH3Q9C0H2 523 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 C2orf40Q9H1Z8 148 aa13.15□□□□□ -0.3
NIP7-201ENST00000254940 NXF3Q9H4D5 531 aaKnown RBP13.15□□□□□ -0.3
NIP7-201ENST00000254940 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.3
NIP7-201ENST00000254940 UPP2O95045 317 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 NR3C1P04150 777 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 ACTN1P12814 892 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 EFNA5P52803 228 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 CBWD2Q8IUF1 395 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 CAGE1Q8TC20 777 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 VWCEQ96DN2 955 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 ADAM2Q99965 735 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 PRMT7Q9NVM4 692 aaPredicted RBP13.14□□□□□ -0.31
NIP7-201ENST00000254940 PRKAG2Q9UGJ0 569 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 LUC7L2Q9Y383 392 aaKnown RBP13.14□□□□□ -0.31
NIP7-201ENST00000254940 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 AFF1P51825 1210 aaKnown RBP13.14□□□□□ -0.31
NIP7-201ENST00000254940 KCNMA1Q12791 1236 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 SCARA3Q6AZY7 606 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 RTN4RL1Q86UN2 441 aaPredicted RBP13.14□□□□□ -0.31
NIP7-201ENST00000254940 LINC01599Q8WXQ3 324 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 POP1Q99575 1024 aaKnown RBP13.14□□□□□ -0.31
NIP7-201ENST00000254940 ARID3AQ99856 593 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 ERVK-5Q9HDB9 667 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 HSPBP1Q9NZL4 362 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 CACNG4Q9UBN1 327 aa13.14□□□□□ -0.31
NIP7-201ENST00000254940 EIF3DO15371 548 aaKnown RBP eCLIP13.13□□□□□ -0.31
NIP7-201ENST00000254940 TIMP1P01033 207 aa13.13□□□□□ -0.31
NIP7-201ENST00000254940 GATMP50440 423 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms