RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 DNM1LO00429 736 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 TBC1D12O60347 775 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 STBD1O95210 358 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 RARAP10276 462 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 FGFR4P22455 802 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 QARSP47897 775 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 GPC5P78333 572 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 MTMR1Q13613 665 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 PGM5Q15124 567 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 SNRNP35Q16560 246 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 C2CD6Q53TS8 623 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 FAM133BQ5BKY9 247 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 PCNX4Q63HM2 1172 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 TAS1R3Q7RTX0 852 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 RHOT2Q8IXI1 618 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 CPXCR1Q8N123 301 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 ATXN2LQ8WWM7 1075 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 THOC1Q96FV9 657 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 ZBED3Q96IU2 234 aaPredicted RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 PAIP2Q9BPZ3 127 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 ST6GALNAC4Q9H4F1 302 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 MLXIPLQ9NP71 852 aa10.87□□□□□ -0.67
COPB1-201ENST00000249923 LARSQ9P2J5 1176 aaKnown RBP10.87□□□□□ -0.67
COPB1-201ENST00000249923 GMNCA6NCL1 334 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 C5orf60A6NFR6 353 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 ZNF862O60290 1169 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 FSBPO95073 299 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 LYPLA2O95372 231 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CYP11B1P15538 503 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 RFX1P22670 979 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 MXI1P50539 228 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 RPS6P62753 249 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 RASA3Q14644 834 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 DLGAP5Q15398 846 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CNPY4Q8N129 248 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 EPS8L3Q8TE67 593 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 PARD3BQ8TEW8 1205 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 TATDN2Q93075 761 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CCDC127Q96BQ5 260 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 ACCSQ96QU6 501 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 PI4K2AQ9BTU6 479 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 PABPC3Q9H361 631 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 RIPK3Q9Y572 518 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 LCTP09848 1927 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 RTN2O75298 545 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CYP1A2P05177 515 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CFHP08603 1231 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 MAPTP10636 758 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 KRT13P13646 458 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 EZRP15311 586 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 KCNA3P22001 575 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CYP1B1Q16678 543 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 TNFAIP8L3Q5GJ75 292 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CCDC137Q6PK04 289 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 ANKS1BQ7Z6G8 1248 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 YTHDF3Q7Z739 585 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 FAM160B2Q86V87 743 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 TEX2Q8IWB9 1127 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 PPM1KQ8N3J5 372 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 ZNF317Q96PQ6 595 aaPredicted RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 PSMD1Q99460 953 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 NUP85Q9BW27 656 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 TMEM206Q9H813 350 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 PTPN22Q9Y2R2 807 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CENPFP49454 3210 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 SRRM3A6NNA2 597 aaPredicted RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 A6NNZ2 444 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 WNT10BO00744 389 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 RGS20O76081 388 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 DRD4P21917 467 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 NPTX2P47972 431 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 PMS2P54278 862 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 MTMR3Q13615 1198 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 TUBB8Q3ZCM7 444 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 HIBCHQ6NVY1 386 aaPredicted RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 STXBP4Q6ZWJ1 553 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 RPAINQ86UA6 219 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 CNKSR1Q969H4 720 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 MRRFQ96E11 262 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 TEPSINQ96N21 525 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 SLC38A10Q9HBR0 1119 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 TBX20Q9UMR3 447 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 SUFUQ9UMX1 484 aa10.86□□□□□ -0.67
COPB1-201ENST00000249923 DIS3Q9Y2L1 958 aaKnown RBP10.86□□□□□ -0.67
COPB1-201ENST00000249923 PMM2O15305 246 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 DRG2P55039 364 aaKnown RBP10.85□□□□□ -0.67
COPB1-201ENST00000249923 PTPRJQ12913 1337 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 DHX34Q14147 1143 aaKnown RBP10.85□□□□□ -0.67
COPB1-201ENST00000249923 NEK9Q8TD19 979 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 ZNF516Q92618 1163 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 SYNGAP1Q96PV0 1343 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 HAUS2Q9NVX0 235 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 COQ4Q9Y3A0 265 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 P4HA2O15460 535 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 CNGA1P29973 690 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 ERMARDQ5T6L9 678 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 MAP4K3Q8IVH8 894 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 ZNF564Q8TBZ8 553 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms