RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 DTX3LQ8TDB6 740 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 DNAJC9Q8WXX5 260 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 FAM129AQ9BZQ8 928 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 INTS2Q9H0H0 1204 aaKnown RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 METTL14Q9HCE5 456 aaKnown RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 NWD2Q9ULI1 1742 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 SLITRK3O94933 977 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 FOSP01100 380 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 GHRP10912 638 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 HSPA6P17066 643 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 MARCKSL1P49006 195 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 TMED1Q13445 227 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 SPOPLQ6IQ16 392 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 PARD3BQ8TEW8 1205 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 PRCCQ92733 491 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 ERP27Q96DN0 273 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 SUDS3Q9H7L9 328 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 AKAP11Q9UKA4 1901 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 GSTA1P08263 222 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 ESRRAP11474 423 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 FLT3P36888 993 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 MMP14P50281 582 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 PRELPP51888 382 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 HAUS6Q7Z4H7 955 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 TRIM59Q8IWR1 403 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 TEX9Q8N6V9 391 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 ARHGEF26Q96DR7 871 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 KMT5AQ9NQR1 393 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 ZNF70Q9UC06 446 aaPredicted RBP12.3□□□□□ -0.44
SOX9-201ENST00000245479 ANAPC5Q9UJX4 755 aa12.3□□□□□ -0.44
SOX9-201ENST00000245479 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 EXOC1LA0A1B0GW35 172 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 NOL4O94818 638 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 MAP3K6O95382 1288 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 EGFRP00533 1210 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
SOX9-201ENST00000245479 SERPINB4P48594 390 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 FMO5P49326 533 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 LAMB3Q13751 1172 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 LONRF1Q17RB8 773 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 IQCKQ8N0W5 287 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 TTLL6Q8N841 843 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 SUPT20HQ8NEM7 779 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 RBM46Q8TBY0 533 aaKnown RBP12.29□□□□□ -0.44
SOX9-201ENST00000245479 ETAA1Q9NY74 926 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 DCTN4Q9UJW0 460 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 A0A0G2JND7 137 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 USP11P51784 963 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 RPS6P62753 249 aaKnown RBP12.29□□□□□ -0.44
SOX9-201ENST00000245479 CDR2Q01850 454 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 STRIP1Q5VSL9 837 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 NCAPG2Q86XI2 1143 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 SLC17A8Q8NDX2 589 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 RNF217Q8TC41 542 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 C11orf70Q9BRQ4 267 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 PICK1Q9NRD5 415 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 MAGED2Q9UNF1 606 aaPredicted RBP12.29□□□□□ -0.44
SOX9-201ENST00000245479 TMEM120BA0PK00 339 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 I3L4J1 428 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 LIG4P49917 911 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 SEPT6Q14141 434 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 QPCTQ16769 361 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 APBB1IPQ7Z5R6 666 aaPredicted RBP12.29□□□□□ -0.44
SOX9-201ENST00000245479 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
SOX9-201ENST00000245479 THNSL1Q8IYQ7 743 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 KIFAP3Q92845 792 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 TATDN2Q93075 761 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 PWWP2AQ96N64 755 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 WRNIP1Q96S55 665 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 CENPKQ9BS16 269 aa12.29□□□□□ -0.44
SOX9-201ENST00000245479 GRIN2DO15399 1336 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 PPFIA2O75334 1257 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 SGPL1O95470 568 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 DPEP1P16444 411 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 KCNA3P22001 575 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 ALDH5A1P51649 535 aaPredicted RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 PDE1CQ14123 709 aaPredicted RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 MEA1Q16626 185 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 SNRNP48Q6IEG0 339 aaKnown RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 CCDC33Q8N5R6 958 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 ATG4CQ96DT6 458 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 ZFP69BQ9UJL9 534 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 GGA2Q9UJY4 613 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 FAF1Q9UNN5 650 aaPredicted RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 ATP9AO75110 1047 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 DNAJC8O75937 253 aaPredicted RBP12.28□□□□□ -0.44
SOX9-201ENST00000245479 PSMC4P43686 418 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 ITIH4Q14624 930 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 ANKRD20A2Q5SQ80 823 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 ANKRD20A1Q5TYW2 823 aa12.28□□□□□ -0.44
SOX9-201ENST00000245479 EPM2AIP1Q7L775 607 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms