RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ZBTB42B2RXF5 422 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 ZBTB48P10074 688 aaPredicted RBP25.09■■□□□ 1.61
MSX2-201ENST00000239243 LAMTOR4Q0VGL1 99 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 ZACNQ401N2 412 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 SLFN11Q7Z7L1 901 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 KRT222Q8N1A0 295 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 EPS8L1Q8TE68 723 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 RUBCNQ92622 972 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 COPS5Q92905 334 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 PDGFCQ9NRA1 345 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 ERAP1Q9NZ08 941 aa25.09■■□□□ 1.61
MSX2-201ENST00000239243 ADGRA2Q96PE1 1338 aa25.08■■□□□ 1.61
MSX2-201ENST00000239243 SEC31AO94979 1220 aaKnown RBP25.08■■□□□ 1.61
MSX2-201ENST00000239243 ACOT2P49753 483 aa25.08■■□□□ 1.61
MSX2-201ENST00000239243 DRP2Q13474 957 aa25.08■■□□□ 1.61
MSX2-201ENST00000239243 TFDP1Q14186 410 aa25.08■■□□□ 1.61
MSX2-201ENST00000239243 WDR44Q5JSH3 913 aa25.08■■□□□ 1.61
MSX2-201ENST00000239243 CRELD2Q6UXH1 353 aaPredicted RBP25.08■■□□□ 1.61
MSX2-201ENST00000239243 RPUSD2Q8IZ73 545 aaKnown RBP25.08■■□□□ 1.61
MSX2-201ENST00000239243 TMCO5BA8MYB1 307 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 CLDN3O15551 220 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 GH1P01241 217 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 VSNL1P62760 191 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 C2orf54Q08AI8 447 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 LONRF2Q1L5Z9 754 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 RHOT2Q8IXI1 618 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 SLC20A1Q8WUM9 679 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 PARK7Q99497 189 aaKnown RBP25.08■■□□□ 1.6
MSX2-201ENST00000239243 HAPLN2Q9GZV7 340 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 CCDC113Q9H0I3 377 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 ISCUQ9H1K1 167 aa25.08■■□□□ 1.6
MSX2-201ENST00000239243 TOM1L1O75674 476 aa25.07■■□□□ 1.6
MSX2-201ENST00000239243 KIF4AO95239 1232 aa25.07■■□□□ 1.6
MSX2-201ENST00000239243 GZMAP12544 262 aa25.07■■□□□ 1.6
MSX2-201ENST00000239243 PDE6CP51160 858 aa25.07■■□□□ 1.6
MSX2-201ENST00000239243 MAPK6Q16659 721 aa25.07■■□□□ 1.6
MSX2-201ENST00000239243 DNAAF5Q86Y56 855 aa25.07■■□□□ 1.6
MSX2-201ENST00000239243 ZBTB45Q96K62 511 aaPredicted RBP25.07■■□□□ 1.6
MSX2-201ENST00000239243 PBKQ96KB5 322 aa25.07■■□□□ 1.6
MSX2-201ENST00000239243 NOCTQ9UK39 431 aaKnown RBP25.07■■□□□ 1.6
MSX2-201ENST00000239243 RBM47A0AV96 593 aaKnown RBP25.06■■□□□ 1.6
MSX2-201ENST00000239243 MSCO60682 206 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 ARHGAP1Q07960 439 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 PEX26Q7Z412 305 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 RNF149Q8NC42 400 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 SLC35G2Q8TBE7 412 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 ZNF516Q92618 1163 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 SUCLA2Q9P2R7 463 aaPredicted RBP25.06■■□□□ 1.6
MSX2-201ENST00000239243 ASAP2O43150 1006 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 CYP26A1O43174 497 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 RTN2O75298 545 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 SGPL1O95470 568 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 C4BPAP04003 597 aaKnown RBP25.06■■□□□ 1.6
MSX2-201ENST00000239243 ABCB4P21439 1286 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 MKRN3Q13064 507 aaKnown RBP25.06■■□□□ 1.6
MSX2-201ENST00000239243 MKRN4PQ13434 485 aaPredicted RBP25.06■■□□□ 1.6
MSX2-201ENST00000239243 TAPT1Q6NXT6 567 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 DAAM2Q86T65 1068 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 CGRRF1Q99675 332 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 PDE11AQ9HCR9 933 aa25.06■■□□□ 1.6
MSX2-201ENST00000239243 TBC1D8O95759 1140 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 AP3M2P53677 418 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 MAP9Q49MG5 647 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 SPRYD7Q5W111 196 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 LRRC71Q8N4P6 559 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 EMID1Q96A84 441 aaPredicted RBP25.05■■□□□ 1.6
MSX2-201ENST00000239243 SELENOOQ9BVL4 669 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 PRKCBP05771 671 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 SRGAP2CP0DJJ0 459 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 PIK3CAP42336 1068 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 HADHBP55084 474 aaKnown RBP25.05■■□□□ 1.6
MSX2-201ENST00000239243 GRM1Q13255 1194 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 BIRC3Q13489 604 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 TCEAL1Q15170 157 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 ZNF484Q5JVG2 852 aa25.05■■□□□ 1.6
MSX2-201ENST00000239243 BEND6Q5SZJ8 279 aaPredicted RBP25.05■■□□□ 1.6
MSX2-201ENST00000239243 NOP9Q86U38 636 aaKnown RBP25.05■■□□□ 1.6
MSX2-201ENST00000239243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.05■■□□□ 1.6
MSX2-201ENST00000239243 PACSIN2Q9UNF0 486 aaPredicted RBP25.05■■□□□ 1.6
MSX2-201ENST00000239243 EDN1P05305 212 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 CYP11B1P15538 503 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 CBX1P83916 185 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 PALB2Q86YC2 1186 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 THAP2Q9H0W7 228 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 RNF216Q9NWF9 866 aaPredicted RBP25.04■■□□□ 1.6
MSX2-201ENST00000239243 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.04■■□□□ 1.6
MSX2-201ENST00000239243 TAS2R14Q9NYV8 317 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 KCNK3O14649 394 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 HLA-DRAP01903 254 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 FTLP02792 175 aaPredicted RBP25.04■■□□□ 1.6
MSX2-201ENST00000239243 CDR2Q01850 454 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 GLE1Q53GS7 698 aaKnown RBP25.04■■□□□ 1.6
MSX2-201ENST00000239243 TDRD10Q5VZ19 366 aaKnown RBP25.04■■□□□ 1.6
MSX2-201ENST00000239243 MAMDC4Q6UXC1 1216 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 SLC47A2Q86VL8 602 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 RHPN2Q8IUC4 686 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 BRSK2Q8IWQ3 736 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 PPTC7Q8NI37 304 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 TATDN2Q93075 761 aa25.04■■□□□ 1.6
MSX2-201ENST00000239243 ACO2Q99798 780 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms