RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 BACE1P56817 501 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 CCT5P48643 541 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 GPS1Q13098 491 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 ICAM1P05362 532 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 TAC1P20366 129 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 PRAMEP78395 509 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 GABPB1Q06547 395 aaPredicted RBP19.57■□□□□ 0.72
CLIP2-201ENST00000223398 PID1Q7Z2X4 250 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 C1orf54Q8WWF1 131 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 HSPA4LO95757 839 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 VEGFAP15692 232 aaPredicted RBP19.57■□□□□ 0.72
CLIP2-201ENST00000223398 ATICP31939 592 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 TPI1P60174 286 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 ACTR2P61160 394 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 PHLDB3Q6NSJ2 640 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 CCDC197Q8NCU1 140 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 ZDHHC15Q96MV8 337 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 NDFIP2Q9NV92 336 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 CEMIPQ8WUJ3 1361 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 DDTLA6NHG4 134 aaPredicted RBP19.57■□□□□ 0.72
CLIP2-201ENST00000223398 KRT37O76014 449 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 SEZ6Q53EL9 994 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 TRIM68Q6AZZ1 485 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 USP49Q70CQ1 688 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 RHOT1Q8IXI2 618 aa19.57■□□□□ 0.72
CLIP2-201ENST00000223398 DIP2BQ9P265 1576 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 GOLGA8QA0A0J9YX86 632 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 GOLGA8OA6NCC3 632 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 GOLGA8NF8WBI6 632 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 PODXLO00592 558 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 TRIM72Q6ZMU5 477 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 C18orf8Q96DM3 657 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 FAN1Q9Y2M0 1017 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 PPP4CP60510 307 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 GLRA4Q5JXX5 417 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 SH3KBP1Q96B97 665 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 TARS2Q9BW92 718 aaKnown RBP19.56■□□□□ 0.72
CLIP2-201ENST00000223398 LSM7Q9UK45 103 aaKnown RBP19.56■□□□□ 0.72
CLIP2-201ENST00000223398 DIS3Q9Y2L1 958 aaKnown RBP19.56■□□□□ 0.72
CLIP2-201ENST00000223398 CCDC188H7C350 402 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 ALDH1A1P00352 501 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 WEE2P0C1S8 567 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 MYBL1P10243 752 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 PAN2Q504Q3 1202 aaKnown RBP19.56■□□□□ 0.72
CLIP2-201ENST00000223398 USP33Q8TEY7 942 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 SYNDIG1Q9H7V2 258 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 SCP2P22307 547 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 RNF135Q8IUD6 432 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 LRRC43Q8N309 656 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 UNC45AQ9H3U1 944 aa19.56■□□□□ 0.72
CLIP2-201ENST00000223398 TTI1O43156 1089 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 ATP9BO43861 1147 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 STK4Q13043 487 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 IFT88Q13099 833 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 KCNB1Q14721 858 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 PDXDC1Q6P996 788 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 NUDT18Q6ZVK8 323 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 C3orf67Q6ZVT6 689 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 PPM1NQ8N819 430 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 RIT2Q99578 217 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 MAGEB5Q9BZ81 275 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 DDX47Q9H0S4 455 aaKnown RBP19.55■□□□□ 0.72
CLIP2-201ENST00000223398 COPEO14579 308 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 ASAP2O43150 1006 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 HADHAP40939 763 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 WHAMMQ8TF30 809 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 KIF19Q2TAC6 998 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 RAPGEF5Q92565 580 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 EGFL8Q99944 293 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 DHX40Q8IX18 779 aaKnown RBP19.55■□□□□ 0.72
CLIP2-201ENST00000223398 MID2Q9UJV3 735 aa19.55■□□□□ 0.72
CLIP2-201ENST00000223398 HSD17B4P51659 736 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 SGSM1Q2NKQ1 1148 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 ZNF467Q7Z7K2 595 aaPredicted RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 RBBP8NLQ8NC74 664 aaPredicted RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 HDAC6Q9UBN7 1215 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 KIAA0391O15091 583 aaKnown RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 ASMTLO95671 621 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 PDGFRAP16234 1089 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 ITPRIPL1Q6GPH6 555 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 SNX19Q92543 992 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 PBXIP1Q96AQ6 731 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 EPAS1Q99814 870 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 PI4K2AQ9BTU6 479 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 GLIS2Q9BZE0 524 aaPredicted RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 ABCB6Q9NP58 842 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 LCMT1Q9UIC8 334 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 FZD1Q9UP38 647 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 RRN3P2A6NIE6 340 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 DNAJC6O75061 913 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 AMHR2Q16671 573 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 SCG3Q8WXD2 468 aaKnown RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 ATXN7L3BQ96GX2 97 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 APOL1O14791 398 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 MAFGO15525 162 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 CD4P01730 458 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 LIG3P49916 1009 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 SARM1Q6SZW1 724 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 CDKL3Q8IVW4 592 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms