RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 PABPC4Q13310 644 aaKnown RBP eCLIP3.98□□□□□ -1.774e-9■■■■□ 25.4
CDKN3-201ENST00000216414 SQSTM1Q13501 440 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 ATXN7L2Q5T6C5 722 aaPredicted RBP3.98□□□□□ -1.77
CDKN3-201ENST00000216414 ARMC6Q6NXE6 501 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 GPR149Q86SP6 731 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 SNX33Q8WV41 574 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 SMG7Q92540 1137 aaKnown RBP3.98□□□□□ -1.77
CDKN3-201ENST00000216414 RNF31Q96EP0 1072 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 ALOXE3Q9BYJ1 711 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 ANO3Q9BYT9 981 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 SLC29A3Q9BZD2 475 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 MS4A5Q9H3V2 200 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 ALG13Q9NP73 1137 aaKnown RBP3.98□□□□□ -1.77
CDKN3-201ENST00000216414 GPRC5DQ9NZD1 345 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 LRIT1Q9P2V4 623 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 MAGEC2Q9UBF1 373 aaPredicted RBP3.98□□□□□ -1.77
CDKN3-201ENST00000216414 PRSS50Q9UI38 385 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 PPP2R3BQ9Y5P8 575 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 NOX1Q9Y5S8 564 aa3.98□□□□□ -1.77
CDKN3-201ENST00000216414 DRGXA6NNA5 263 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 MGST3O14880 152 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 TMEM127O75204 238 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 RBMXL2O75526 392 aaKnown RBP3.97□□□□□ -1.77
CDKN3-201ENST00000216414 ASMTLO95671 621 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 DSG1Q02413 1049 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 SCAPQ12770 1279 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 FOXF2Q12947 444 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 ZNF169Q14929 603 aaPredicted RBP3.97□□□□□ -1.77
CDKN3-201ENST00000216414 MFSD14BQ5SR56 506 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 PRAMEF14Q5SWL7 426 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 AGAP9Q5VTM2 703 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 Q6ZNX1 250 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 MAPKAPK5Q8IW41 473 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 SRRM1Q8IYB3 904 aaKnown RBP3.97□□□□□ -1.77
CDKN3-201ENST00000216414 OR56A1Q8NGH5 318 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 OR14C36Q8NHC7 312 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 SLC35B2Q8TB61 432 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 GPR101Q96P66 508 aaPredicted RBP3.97□□□□□ -1.77
CDKN3-201ENST00000216414 ORAI3Q9BRQ5 295 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 BRIP1Q9BX63 1249 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 CASS4Q9NQ75 786 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 SEMA4GQ9NTN9 838 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 NUMBLQ9Y6R0 609 aa3.97□□□□□ -1.77
CDKN3-201ENST00000216414 DNAJC9-AS1A6NH13 148 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 E9PSI1 815 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 ELANEP08246 267 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 LSP1P33241 339 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 RARRES1P49788 294 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 MANFP55145 182 aaKnown RBP3.96□□□□□ -1.78
CDKN3-201ENST00000216414 RAP2BP61225 183 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 MEF2AQ02078 507 aaPredicted RBP3.96□□□□□ -1.78
CDKN3-201ENST00000216414 TRIM25Q14258 630 aaKnown RBP3.96□□□□□ -1.78
CDKN3-201ENST00000216414 SART3Q15020 963 aaKnown RBP3.96□□□□□ -1.78
CDKN3-201ENST00000216414 C19orf54Q5BKX5 351 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 GPR158Q5T848 1215 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 TSHZ3Q63HK5 1081 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 KIF18BQ86Y91 864 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 RHOT2Q8IXI1 618 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 TMEM132CQ8N3T6 1108 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 ZNF610Q8N9Z0 462 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 SCARB1Q8WTV0 552 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 ZSWIM1Q9BR11 485 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 OSBPL2Q9H1P3 480 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 KLHL11Q9NVR0 708 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 TBCCD1Q9NVR7 557 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 KCNG1Q9UIX4 513 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 TMPRSS11EQ9UL52 423 aa3.96□□□□□ -1.78
CDKN3-201ENST00000216414 CDK11AQ9UQ88 783 aaPredicted RBP3.96□□□□□ -1.78
CDKN3-201ENST00000216414 LRRC3CA6NJW4 275 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 RAB11FIP3O75154 756 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 RFPL3O75679 317 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 GASTP01350 101 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 CTSSP25774 331 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 PTPN7P35236 360 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 FLT3LGP49771 235 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 CLRN1P58418 232 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 PHC1P78364 1004 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 MRPS35P82673 323 aaKnown RBP3.95□□□□□ -1.78
CDKN3-201ENST00000216414 NHLH1Q02575 133 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 BMS1Q14692 1282 aaKnown RBP3.95□□□□□ -1.78
CDKN3-201ENST00000216414 B3GNTL1Q67FW5 361 aaPredicted RBP3.95□□□□□ -1.78
CDKN3-201ENST00000216414 MED25Q71SY5 747 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 ACTRT2Q8TDY3 377 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 ZNF480Q8WV37 535 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 RSAD2Q8WXG1 361 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 C8orf37Q96NL8 207 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 REXO4Q9GZR2 422 aaKnown RBP3.95□□□□□ -1.78
CDKN3-201ENST00000216414 KLK15Q9H2R5 256 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 PRDM12Q9H4Q4 367 aa3.95□□□□□ -1.78
CDKN3-201ENST00000216414 CXorf49A8MYA2 514 aaPredicted RBP3.94□□□□□ -1.78
CDKN3-201ENST00000216414 PJA2O43164 708 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 ADCY6O43306 1168 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 KDM1AO60341 852 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 C1QL1O75973 258 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 CRHR1P34998 444 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 CACNA2D1P54289 1103 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 LGALS4P56470 323 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 OCA2Q04671 838 aa3.94□□□□□ -1.78
CDKN3-201ENST00000216414 SRSF4Q08170 494 aaKnown RBP3.94□□□□□ -1.78
CDKN3-201ENST00000216414 TERF2Q15554 542 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms