RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 SNX24Q9Y343 169 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 RIPK3Q9Y572 518 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PCDHA3Q9Y5H8 950 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ZNFX1Q9P2E3 1918 aaKnown RBP23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ZNF862O60290 1169 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 NR3C2P08235 984 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PYGMP11217 842 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GBP1P32455 592 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 CYP1B1Q16678 543 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ZNF473Q8WTR7 871 aaKnown RBP23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ATG4CQ96DT6 458 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 CCT8L2Q96SF2 557 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 TOPORSQ9NS56 1045 aaPredicted RBP23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 BCCIPQ9P287 314 aaKnown RBP eCLIP23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GABBR1Q9UBS5 961 aa23.69■■□□□ 1.38
NIPSNAP1-201ENST00000216121 EGFRP00533 1210 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PPP2R2AP63151 447 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 KRT71Q3SY84 523 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 SV2AQ7L0J3 742 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 TADA2BQ86TJ2 420 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 MYCBPAPQ8TBZ2 947 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 POMGNT1Q8WZA1 660 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ATP6V0A1Q93050 837 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ZNF653Q96CK0 615 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 WNK4Q96J92 1243 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 EPB41L4BQ9H329 900 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PDLIM7Q9NR12 457 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GRHL1Q9NZI5 618 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 NOVA2Q9UNW9 492 aaKnown RBP23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 KIAA1217Q5T5P2 1943 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 DKC1O60832 514 aaKnown RBP eCLIP23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 FAM107AO95990 144 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 NUDT17P0C025 328 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 SEC24CP53992 1094 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PLTPP55058 493 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ACAD10Q6JQN1 1059 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 TTC27Q6P3X3 843 aa23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PABPC3Q9H361 631 aaKnown RBP23.68■■□□□ 1.38
NIPSNAP1-201ENST00000216121 CPP00450 1065 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 SOX10P56693 466 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 RTP1P59025 263 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ODF2Q5BJF6 829 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 SLC13A5Q86YT5 568 aaPredicted RBP23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 FBXO25Q8TCJ0 367 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ARID2Q68CP9 1835 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ADGRA3Q8IWK6 1321 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 SPOPO43791 374 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 KCNA2P16389 499 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GARTP22102 1010 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PMS2P54278 862 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 IFFO1Q0D2I5 559 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 BRDTQ58F21 947 aaPredicted RBP23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 CCDC137Q6PK04 289 aaKnown RBP23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ENOSF1Q7L5Y1 443 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GPD1LQ8N335 351 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 TATDN2Q93075 761 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 BTBD6Q96KE9 485 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 RUNDC3BQ96NL0 473 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 MTUS1Q9ULD2 1270 aa23.67■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GCNT1Q02742 428 aa23.66■■□□□ 1.38
NIPSNAP1-201ENST00000216121 MCPH1Q8NEM0 835 aa23.66■■□□□ 1.38
NIPSNAP1-201ENST00000216121 TLCD1Q96CP7 247 aa23.66■■□□□ 1.38
NIPSNAP1-201ENST00000216121 CNOT8Q9UFF9 292 aaKnown RBP23.66■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PARP2Q9UGN5 583 aa23.66■■□□□ 1.38
NIPSNAP1-201ENST00000216121 TULP1O00294 542 aaPredicted RBP23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 DGAT1O75907 488 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 RPL21P46778 160 aaKnown RBP23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 MAGOHP61326 146 aaKnown RBP23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 CPNE8Q86YQ8 564 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 REPS2Q8NFH8 660 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 JDP2Q8WYK2 163 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 DHX38Q92620 1227 aaKnown RBP23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 LRRC4CQ9HCJ2 640 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 E7EVH7 732 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 ZC3H11AO75152 810 aaKnown RBP eCLIP23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PAEPP09466 180 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 BACE1P56817 501 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 RWDD2BP57060 319 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 SIX1Q15475 284 aaPredicted RBP23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 CLEC16AQ2KHT3 1053 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 HOOK3Q86VS8 718 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 C3orf20Q8ND61 904 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 GGA2Q9UJY4 613 aa23.65■■□□□ 1.38
NIPSNAP1-201ENST00000216121 TCRBV7S2A1N4TA0A589 114 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 DCDC2CA8MYV0 355 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 HNRNPDLO14979 420 aaKnown RBP23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 RGS20O76081 388 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PSAPP07602 524 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 DLATP10515 647 aaKnown RBP23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 COILP38432 576 aaPredicted RBP23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 SWSAP1Q6NVH7 229 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 MICALCLQ6ZW33 695 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 NSUN6Q8TEA1 469 aaKnown RBP23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 FAM81BQ96LP2 452 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 PPANQ9NQ55 473 aaKnown RBP23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 XPNPEP1Q9NQW7 623 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 RLFQ13129 1914 aa23.64■■□□□ 1.38
NIPSNAP1-201ENST00000216121 COL11A1P12107 1806 aaPredicted RBP23.64■■□□□ 1.37
NIPSNAP1-201ENST00000216121 NFASCO94856 1347 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms