RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 LOC102724159A0A0B4J2E5 919 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 PWP2Q15269 919 aaKnown RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 ATG9AQ7Z3C6 839 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 IP6K2Q9UHH9 426 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 ZNF711Q9Y462 761 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 CDK12Q9NYV4 1490 aaPredicted RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 APRTP07741 180 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 TYK2P29597 1187 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 KPNA2P52292 529 aaKnown RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 MMS22LQ6ZRQ5 1243 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 ZNF579Q8NAF0 562 aaKnown RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 RMDN1Q96DB5 314 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 OSBPL5Q9H0X9 879 aaPredicted RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 FAM49BQ9NUQ9 324 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 PCMTD2Q9NV79 361 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 FHOD1Q9Y613 1164 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 ADGRA2Q96PE1 1338 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 SLC9A1P19634 815 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 BCAR1P56945 870 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 PLIN5Q00G26 463 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 TAGAPQ8N103 731 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 GPD1LQ8N335 351 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 SLC25A41Q8N5S1 370 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 ULK4Q96C45 1275 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 NPHP4O75161 1426 aaPredicted RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 FOXP4Q8IVH2 680 aaPredicted RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 TTC8Q8TAM2 541 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 BPIFA3Q9BQP9 254 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 CYP19A1P11511 503 aaPredicted RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 CSE1LP55060 971 aaKnown RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 AP3B2Q13367 1082 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 KIAA1755Q5JYT7 1200 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 RNF219Q5W0B1 726 aaPredicted RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 RAD9BQ6WBX8 426 aa14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 ZNF473Q8WTR7 871 aaKnown RBP14.4□□□□□ -0.1
TGFBR3-201ENST00000212355 NBPF26B4DH59 902 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 ASNSP08243 561 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 GRIK1P39086 918 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 SEC24CP53992 1094 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 PRAMEP78395 509 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 BTKQ06187 659 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 FLOT2Q14254 428 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 NBPF10Q6P3W6 841 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 NBPF15Q8N660 670 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 KLC4Q9NSK0 619 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 LDHAP00338 332 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 SF3B3Q15393 1217 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 FAM117BQ6P1L5 589 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 EXOC8Q8IYI6 725 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 DHX38Q92620 1227 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 GCNAQ96QF7 691 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 ZBTB18Q99592 522 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 ADNPQ9H2P0 1102 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 MEFVO15553 781 aaPredicted RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 RC3H1Q5TC82 1133 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 LAYNQ6UX15 382 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 PJA2O43164 708 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 KRT38O76015 456 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 UPP2O95045 317 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 WEE2P0C1S8 567 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 AVPR1AP37288 418 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 PHKA2P46019 1235 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 KIZQ2M2Z5 673 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 HAUS6Q7Z4H7 955 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 ATP11CQ8NB49 1132 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 TRIM15Q9C019 465 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.39□□□□□ -0.111e-7■■■■□ 19.9
TGFBR3-201ENST00000212355 PLEKHG1Q9ULL1 1385 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 STK36Q9NRP7 1315 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 CALB1P05937 261 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 P4HBP07237 508 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 CIITAP33076 1130 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 XPO7Q9UIA9 1087 aaKnown RBP14.39□□□□□ -0.11
TGFBR3-201ENST00000212355 MYMKA6NI61 221 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 APOL1O14791 398 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 RAD51CO43502 376 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 STK4Q13043 487 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 TUBB6Q9BUF5 446 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 PRKAG2Q9UGJ0 569 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 CHMP2BQ9UQN3 213 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 ENO3P13929 434 aaPredicted RBP14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 PAPOLAP51003 745 aaKnown RBP14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 KRT39Q6A163 491 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 BEST2Q8NFU1 509 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 FAM136AQ96C01 138 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 VPS39Q96JC1 886 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 ZFYVE19Q96K21 471 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 TRABDQ9H4I3 376 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 HPCAL4Q9UM19 191 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 MYO3BQ8WXR4 1341 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 ENO4A6NNW6 628 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 KCNA2P16389 499 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 CHRNA3P32297 505 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 ETFBP38117 255 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 AP2B1P63010 937 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 KLHL38Q2WGJ6 581 aa14.38□□□□□ -0.11
TGFBR3-201ENST00000212355 WDR72Q3MJ13 1102 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms