RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CACNA2D3Q8IZS8 1091 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 RAB20Q9NX57 234 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 NLRP11P59045 1033 aaKnown RBP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 BFSP1Q12934 665 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 Q4G0T1 1027 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 NT5DC1Q5TFE4 455 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 CENPPQ6IPU0 288 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 HSD3B7Q9H2F3 369 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 CYP26B1Q9NR63 512 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 KLK14Q9P0G3 267 aa12.91□□□□□ -0.34
CHPF2-201ENST00000035307 AGO2Q9UKV8 859 aaKnown RBP12.91□□□□□ -0.34
CHPF2-201ENST00000035307 RAD51CO43502 376 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 FMO5P49326 533 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 MAGOHP61326 146 aaKnown RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 HHATQ5VTY9 493 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 USP50Q70EL3 339 aaPredicted RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 CHST13Q8NET6 341 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 CLEC4DQ8WXI8 215 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 ERGIC2Q96RQ1 377 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 ANKZF1Q9H8Y5 726 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 OSGEPQ9NPF4 335 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 SETD4Q9NVD3 440 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 ZNF131P52739 623 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 E2F5Q15329 346 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 FAM133BQ5BKY9 247 aaKnown RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 BEND6Q5SZJ8 279 aaPredicted RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 TWF2Q6IBS0 349 aaKnown RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 CCNI2Q6ZMN8 369 aaPredicted RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 SLC35G2Q8TBE7 412 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 RSAD2Q8WXG1 361 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 CPA5Q8WXQ8 436 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 DNAJC19Q96DA6 116 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 NUP85Q9BW27 656 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
CHPF2-201ENST00000035307 PASKQ96RG2 1323 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 BTBD19C9JJ37 291 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 M0QZ92 97 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 FDX1P10109 184 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 PPATQ06203 517 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 PPP2R5AQ15172 486 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 SPOPLQ6IQ16 392 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 TBC1D31Q96DN5 1066 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 PCSK1NQ9UHG2 260 aa12.9□□□□□ -0.34
CHPF2-201ENST00000035307 PLS3P13797 630 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 SOX5P35711 763 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 SEC24CP53992 1094 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 SLC12A3P55017 1021 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 TMEM63BQ5T3F8 832 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 EMBQ6PCB8 327 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 SCFD2Q8WU76 684 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 PBKQ96KB5 322 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 RNPC3Q96LT9 517 aaKnown RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 PARK7Q99497 189 aaKnown RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 AFG3L2Q9Y4W6 797 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 PDXKO00764 312 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 DGAT1O75907 488 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 ECEL1O95672 775 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 TMED2Q15363 201 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 DHX38Q92620 1227 aaKnown RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 FAM149B1Q96BN6 582 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 ADAM22Q9P0K1 906 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 TNNC2P02585 160 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 KRT1P04264 644 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 GTF2A2P52657 109 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 AMHR2Q16671 573 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 GKAP1Q5VSY0 366 aaPredicted RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 TCP11Q8WWU5 503 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 SLC5A5Q92911 643 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 RNF34Q969K3 372 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 ACSF2Q96CM8 615 aaPredicted RBP12.89□□□□□ -0.35
CHPF2-201ENST00000035307 DNAJC7Q99615 494 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 TXNDC16Q9P2K2 825 aa12.89□□□□□ -0.35
CHPF2-201ENST00000035307 PDE2AO00408 941 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 OATP04181 439 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 RARBP10826 455 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ORC2Q13416 577 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 IRF2BP1Q8IU81 584 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 ZNF564Q8TBZ8 553 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.88□□□□□ -0.35
CHPF2-201ENST00000035307 MYO7AQ13402 2215 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 WEE2P0C1S8 567 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 CIITAP33076 1130 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 NUMBP49757 651 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 DLG4P78352 724 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 TMEM119Q4V9L6 283 aa12.88□□□□□ -0.35
CHPF2-201ENST00000035307 KLHDC7AQ5VTJ3 777 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms