RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 SCP2P22307 547 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 MCM4P33991 863 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 ACOT2P49753 483 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 ALCAMQ13740 583 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 KCNB1Q14721 858 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 SPOUT1Q5T280 376 aaKnown RBP13.16□□□□□ -0.3
SYPL1-201ENST00000011473 FAM43BQ6ZT52 329 aaPredicted RBP13.16□□□□□ -0.3
SYPL1-201ENST00000011473 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 ARNTL2Q8WYA1 636 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 SAAL1Q96ER3 474 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 TMEM206Q9H813 350 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 EXOC7Q9UPT5 735 aa13.16□□□□□ -0.3
SYPL1-201ENST00000011473 GBF1Q92538 1859 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 EPOPA6NHQ4 379 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 RFXAPO00287 272 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 CLIC2O15247 247 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 HOXA2O43364 376 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 FAM189A1O60320 539 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 CSPG5O95196 566 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 SMC2O95347 1197 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 CXCL8P10145 99 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 ABCD1P33897 745 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 GRM5P41594 1212 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 SPAG1Q07617 926 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 PSMD2Q13200 908 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
SYPL1-201ENST00000011473 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 CCDC47Q96A33 483 aaKnown RBP13.15□□□□□ -0.3
SYPL1-201ENST00000011473 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
SYPL1-201ENST00000011473 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 MAN1B1Q9UKM7 699 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 REV3LO60673 3130 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYPL1-201ENST00000011473 DDHD2O94830 711 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
SYPL1-201ENST00000011473 LRRC43Q8N309 656 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 TMEM130Q8N3G9 435 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 RABGGTAQ92696 567 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 GSDMAQ96QA5 445 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 CCDC94Q9BW85 323 aaPredicted RBP13.15□□□□□ -0.3
SYPL1-201ENST00000011473 CWH43Q9H720 699 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
SYPL1-201ENST00000011473 GIT1Q9Y2X7 761 aa13.15□□□□□ -0.3
SYPL1-201ENST00000011473 PRUNE2Q8WUY3 3088 aa13.15□□□□□ -0.31
SYPL1-201ENST00000011473 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
SYPL1-201ENST00000011473 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 PTGESO14684 152 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 BMP6P22004 513 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 GRIN2CQ14957 1233 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 KNOP1Q1ED39 458 aaKnown RBP13.14□□□□□ -0.31
SYPL1-201ENST00000011473 BMT2Q1RMZ1 405 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 ZNF697Q5TEC3 545 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 APBB1IPQ7Z5R6 666 aaPredicted RBP13.14□□□□□ -0.31
SYPL1-201ENST00000011473 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
SYPL1-201ENST00000011473 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 CLSTN2Q9H4D0 955 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 STYXL1Q9Y6J8 313 aa13.14□□□□□ -0.31
SYPL1-201ENST00000011473 OGTO15294 1046 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 CTNNB1P35222 781 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 URGCPQ8TCY9 931 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 TGS1Q96RS0 853 aaKnown RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 RPS6KC1Q96S38 1066 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 NUP62CLQ9H1M0 184 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 PRDM12Q9H4Q4 367 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 UBN1Q9NPG3 1134 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 RMND1Q9NWS8 449 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 F8W810 466 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 PRCPP42785 496 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 CYP2J2P51589 502 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 YARSP54577 528 aaKnown RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 ENOX2Q16206 610 aaKnown RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 ZNF658Q5TYW1 1059 aaPredicted RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 CRELD2Q6UXH1 353 aaPredicted RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 TMEM173Q86WV6 379 aaPredicted RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 DEFB123Q8N688 67 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 RDH13Q8NBN7 331 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 GDPD5Q8WTR4 605 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 SNX27Q96L92 541 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
SYPL1-201ENST00000011473 KCTD10Q9H3F6 313 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 GOLGA2P5Q9HBQ8 144 aa13.13□□□□□ -0.31
SYPL1-201ENST00000011473 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms