RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SKAP2O75563 359 aaPredicted RBP15.03■□□□□ -0
USH1C-201ENST00000005226 ANP32DO95626 131 aa15.03■□□□□ -0
USH1C-201ENST00000005226 ADRB2P07550 413 aa15.03■□□□□ -0
USH1C-201ENST00000005226 KRT16P08779 473 aa15.03■□□□□ -0
USH1C-201ENST00000005226 NQO1P15559 274 aaKnown RBP15.03■□□□□ -0
USH1C-201ENST00000005226 ADRA2BP18089 450 aa15.03■□□□□ -0
USH1C-201ENST00000005226 SLC8A1P32418 973 aa15.03■□□□□ -0
USH1C-201ENST00000005226 PDE6CP51160 858 aa15.03■□□□□ -0
USH1C-201ENST00000005226 HADHBP55084 474 aaKnown RBP15.03■□□□□ -0
USH1C-201ENST00000005226 RASA3Q14644 834 aa15.03■□□□□ -0
USH1C-201ENST00000005226 NAA25Q14CX7 972 aa15.03■□□□□ -0
USH1C-201ENST00000005226 VPS72Q15906 364 aa15.03■□□□□ -0
USH1C-201ENST00000005226 CEP55Q53EZ4 464 aa15.03■□□□□ -0
USH1C-201ENST00000005226 SGO2Q562F6 1265 aa15.03■□□□□ -0
USH1C-201ENST00000005226 TAOK1Q7L7X3 1001 aa15.03■□□□□ -0
USH1C-201ENST00000005226 MAGEC3Q8TD91 643 aa15.03■□□□□ -0
USH1C-201ENST00000005226 TMEM109Q9BVC6 243 aa15.03■□□□□ -0
USH1C-201ENST00000005226 HSPBP1Q9NZL4 362 aa15.03■□□□□ -0
USH1C-201ENST00000005226 R3HDM2Q9Y2K5 976 aaKnown RBP15.03■□□□□ -0
USH1C-201ENST00000005226 O00370 1275 aa15.02■□□□□ -0
USH1C-201ENST00000005226 POLRMTO00411 1230 aaKnown RBP15.02■□□□□ -0
USH1C-201ENST00000005226 POLR2MP0CAP2 368 aa15.02■□□□□ -0
USH1C-201ENST00000005226 HSPA6P17066 643 aa15.02■□□□□ -0
USH1C-201ENST00000005226 SSTR3P32745 418 aaPredicted RBP15.02■□□□□ -0
USH1C-201ENST00000005226 RWDD2BP57060 319 aa15.02■□□□□ -0
USH1C-201ENST00000005226 BTNL9Q6UXG8 535 aa15.02■□□□□ -0
USH1C-201ENST00000005226 CBWD2Q8IUF1 395 aa15.02■□□□□ -0
USH1C-201ENST00000005226 FITM2Q8N6M3 262 aa15.02■□□□□ -0
USH1C-201ENST00000005226 MIEF2Q96C03 454 aa15.02■□□□□ -0
USH1C-201ENST00000005226 RMDN2Q96LZ7 410 aa15.02■□□□□ -0
USH1C-201ENST00000005226 ZDHHC15Q96MV8 337 aa15.02■□□□□ -0
USH1C-201ENST00000005226 STRA6Q9BX79 667 aa15.02■□□□□ -0
USH1C-201ENST00000005226 ADAM33Q9BZ11 813 aa15.02■□□□□ -0
USH1C-201ENST00000005226 NSRP1Q9H0G5 558 aaKnown RBP15.02■□□□□ -0
USH1C-201ENST00000005226 TAOK3Q9H2K8 898 aa15.02■□□□□ -0
USH1C-201ENST00000005226 CCDC134Q9H6E4 229 aa15.02■□□□□ -0
USH1C-201ENST00000005226 DONSONQ9NYP3 566 aa15.02■□□□□ -0
USH1C-201ENST00000005226 SEL1LQ9UBV2 794 aa15.02■□□□□ -0
USH1C-201ENST00000005226 AHDC1Q5TGY3 1603 aaPredicted RBP15.02■□□□□ -0
USH1C-201ENST00000005226 SLC16A4O15374 487 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 GSTA1P08263 222 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 BRAFP15056 766 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 PAX7P23759 505 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 ITGA8P53708 1063 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 CYP1B1Q16678 543 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 EP400NLQ6ZTU2 488 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 INTS8Q75QN2 995 aaKnown RBP15.02□□□□□ -0.01
USH1C-201ENST00000005226 GMCL1P1Q8NEA9 526 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 TACO1Q9BSH4 297 aaKnown RBP15.02□□□□□ -0.01
USH1C-201ENST00000005226 KIFC3Q9BVG8 833 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 HOMER3Q9NSC5 361 aa15.02□□□□□ -0.01
USH1C-201ENST00000005226 GREB1LQ9C091 1923 aaPredicted RBP15.02□□□□□ -0.01
USH1C-201ENST00000005226 EIF4E1BA6NMX2 242 aaKnown RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 IPO5O00410 1097 aaKnown RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 OAS1P00973 400 aaKnown RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 MXI1P50539 228 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 CETN1Q12798 172 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 HP1BP3Q5SSJ5 553 aaPredicted RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 RBM26Q5T8P6 1007 aaKnown RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 FAM47EQ6ZV65 393 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 FAM71AQ8IYT1 594 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 PSPC1Q8WXF1 523 aaKnown RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 KLHL29Q96CT2 875 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 C9orf72Q96LT7 481 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 PAIP2Q9BPZ3 127 aaKnown RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 PI4K2AQ9BTU6 479 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 FBXO28Q9NVF7 368 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 GRIPAP1Q4V328 841 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 CGB2Q6NT52 195 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 SLC9A9Q8IVB4 645 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 SRRM1Q8IYB3 904 aaKnown RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 ATP6V0A4Q9HBG4 840 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 PIK3CDO00329 1044 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 CYP11B1P15538 503 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 STAT2P52630 851 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 MGAT5Q09328 741 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 ZNF568Q3ZCX4 644 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 MFSD5Q6N075 450 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 CYFIP1Q7L576 1253 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 XXYLT1Q8NBI6 393 aa15.01□□□□□ -0.01
USH1C-201ENST00000005226 STMN4Q9H169 189 aaPredicted RBP15.01□□□□□ -0.01
USH1C-201ENST00000005226 THAP12O43422 761 aa15□□□□□ -0.01
USH1C-201ENST00000005226 DIAPH2O60879 1101 aa15□□□□□ -0.01
USH1C-201ENST00000005226 GGPS1O95749 300 aa15□□□□□ -0.01
USH1C-201ENST00000005226 ITGB5P18084 799 aa15□□□□□ -0.01
USH1C-201ENST00000005226 IVDP26440 423 aa15□□□□□ -0.01
USH1C-201ENST00000005226 GJC1P36383 396 aa15□□□□□ -0.01
USH1C-201ENST00000005226 ADCY8P40145 1251 aa15□□□□□ -0.01
USH1C-201ENST00000005226 PEX3P56589 373 aa15□□□□□ -0.01
USH1C-201ENST00000005226 CLUL1Q15846 466 aa15□□□□□ -0.01
USH1C-201ENST00000005226 TRMT10CQ7L0Y3 403 aaKnown RBP15□□□□□ -0.01
USH1C-201ENST00000005226 SPATA21Q7Z572 469 aa15□□□□□ -0.01
USH1C-201ENST00000005226 TEKT3Q9BXF9 490 aa15□□□□□ -0.01
USH1C-201ENST00000005226 WDR11Q9BZH6 1224 aa15□□□□□ -0.01
USH1C-201ENST00000005226 ANAPC7Q9UJX3 599 aa15□□□□□ -0.01
USH1C-201ENST00000005226 TAF1LQ8IZX4 1826 aa15□□□□□ -0.01
USH1C-201ENST00000005226 SUN1O94901 812 aa15□□□□□ -0.01
USH1C-201ENST00000005226 CYP1A2P05177 515 aa15□□□□□ -0.01
USH1C-201ENST00000005226 COPS2P61201 443 aa15□□□□□ -0.01
USH1C-201ENST00000005226 GALNTL6Q49A17 601 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms