RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 HPS3Q969F9 1004 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 C18orf8Q96DM3 657 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 TMEM169Q96HH4 297 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 AGPAT1Q99943 283 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 SIK2Q9H0K1 926 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 VTA1Q9NP79 307 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 KCNQ5Q9NR82 932 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 KLHL14Q9P2G3 628 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 MID2Q9UJV3 735 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 GPC4O75487 556 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 Q4G0T1 1027 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 RHOT1Q8IXI2 618 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 P2RX7Q99572 595 aaKnown RBP11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 KIF2CQ99661 725 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 EPAS1Q99814 870 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 NT5C1AQ9BXI3 368 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 DYRK4Q9NR20 520 aa11.01□□□□□ -0.65
NIPAL3-201ENST00000003912 CYP26A1O43174 497 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 CTDNEP1O95476 244 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 AKR1A1P14550 325 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 ATP11AP98196 1134 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 PDXDC1Q6P996 788 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 RNF10Q8N5U6 811 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 LRRC8CQ8TDW0 803 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 ZC3H15Q8WU90 426 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 CFAP36Q96G28 342 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 STK33Q9BYT3 514 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 DHX35Q9H5Z1 703 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 DDX4Q9NQI0 724 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 GOLGA8QA0A0J9YX86 632 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 GOLGA8OA6NCC3 632 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 GOLGA8NF8WBI6 632 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 SLC37A4O43826 429 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 SERPINB6P35237 376 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 NAMPTP43490 491 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 TAF6P49848 677 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 RASSF2P50749 326 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 HSD17B4P51659 736 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 C2orf54Q08AI8 447 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 ZC2HC1CQ53FD0 456 aaPredicted RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 MICALL1Q8N3F8 863 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 PYROXD1Q8WU10 500 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 DEPDC1BQ8WUY9 529 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 SEPT5Q99719 369 aaPredicted RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 MTG1Q9BT17 334 aaPredicted RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 TARS2Q9BW92 718 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 ABHD16BQ9H3Z7 469 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 TMEM8AQ9HCN3 771 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 MOSPD1Q9UJG1 213 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 ATP8A1Q9Y2Q0 1164 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 HGSO14964 777 aaPredicted RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 P4HA2O15460 535 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 ARP10275 920 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 BCAR1P56945 870 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 DPF3Q92784 378 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 ZNF512Q96ME7 567 aaPredicted RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 AP1M1Q9BXS5 423 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 IL25Q9H293 177 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 IRAK4Q9NWZ3 460 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 TBX20Q9UMR3 447 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 PPME1Q9Y570 386 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 OAS2P29728 719 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 PAPOLAP51003 745 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 FKBP1BP68106 108 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 PPARDQ03181 441 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 VGLL4Q14135 290 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 MAPRE1Q15691 268 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 HEATR6Q6AI08 1181 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 POTEAQ6S8J7 498 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 NOP9Q86U38 636 aaKnown RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 GLYCTKQ8IVS8 523 aa11□□□□□ -0.65
NIPAL3-201ENST00000003912 CDKL3Q8IVW4 592 aaPredicted RBP11□□□□□ -0.65
NIPAL3-201ENST00000003912 MT-ND3P03897 115 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 PTPRAP18433 802 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ACADSBP45954 432 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ALDH1A3P47895 512 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 IL9RQ01113 521 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 KLC3Q6P597 504 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 KCNB2Q92953 911 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ARHGEF2Q92974 986 aaKnown RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 WNT8AQ9H1J5 351 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 PLEKHA5Q9HAU0 1116 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 LIMA1Q9UHB6 759 aaKnown RBP10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ZDHHC9Q9Y397 364 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 TRIM17Q9Y577 477 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 GAKO14976 1311 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 TTC26A0AVF1 554 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 RTN2O75298 545 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 PDGFRBP09619 1106 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 KRT3P12035 628 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 MNAT1P51948 309 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ERVK-24P63145 666 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 MGAT5BQ3V5L5 792 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 PTF1AQ7RTS3 328 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 HEMGNQ9BXL5 484 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 FAM8A1Q9UBU6 413 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 ATP11BQ9Y2G3 1177 aa10.99□□□□□ -0.65
NIPAL3-201ENST00000003912 MED1Q15648 1581 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms