RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Zc3hav1Q3UPF5 946 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Krt73Q6NXH9 539 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ttc23Q8CHY7 488 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ttc30a1Q99J38 664 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ccdc81Q9D5W4 654 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Q9D937 123 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Mrpl46Q9EQI8 283 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Abcc3B2RX12 1523 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 ChrngP04760 519 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Myl2P51667 166 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Eif3eP60229 445 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Vamp7P70280 220 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Catsper3Q80W99 395 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Osbpl2Q8BX94 484 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Rab14Q91V41 215 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Homer3Q99JP6 356 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Fam8a1Q3URQ4 399 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ttf2Q5NC05 1138 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Fam120bQ6RI63 786 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Moxd2Q7TT41 619 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Tbc1d22bQ80VE5 505 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Psmd5Q8BJY1 504 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Q8BP99 230 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Znrd1-asQ8R0E5 213 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Atp5oQ9DB20 213 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ifi30Q9ESY9 248 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Anxa9Q9JHQ0 345 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm7168A0AUV4 508 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Hmgxb3G3X9M3 1254 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Psma2P49722 234 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Fam193bQ3U2K0 892 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Cyfip2Q5SQX6 1253 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 H2afy2Q8CCK0 372 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 FdpsQ920E5 353 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Tada1Q99LM9 335 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 FopnlQ9CZS3 174 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Dusp10Q9ESS0 483 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ace3D0G895 737 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Mpp3O88910 568 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Slc1a1P51906 523 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Tdpoz2Q717B2 364 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Scfd1Q8BRF7 639 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gpc5Q8CAL5 572 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Olfr1494Q8VGP8 315 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Mad2l2Q9D752 211 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Ddx21Q9JIK5 851 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gm28897A0A087WP44 222 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Osbpl9A2A8Z1 736 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Rhox3fA2ANE1 215 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Pfkfb3A7UAK5 555 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Slc35g2D3YVE8 412 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 S100a6P14069 89 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Setd4P58467 439 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Eno4Q8C042 619 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Dclre1bQ8C7W7 541 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Kiaa0391Q8JZY4 584 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 NptxrQ99J85 493 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Foxp4Q9DBY0 795 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Stk25Q9Z2W1 426 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Serpinb2P12388 415 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Idi1P58044 227 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Sec31aQ3UPL0 1230 aaKnown RBP12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Dna2Q6ZQJ5 1062 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gucy1b2Q8BXH3 824 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 N4bp3Q8C7U1 537 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Rmnd1Q8CI78 450 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Rims1Q99NE5 1463 aa12.56□□□□□ -0.4
Trim56-201ENSMUST00000054384 Adcy2Q80TL1 1090 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Prpf18Q8BM39 342 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Olfr866Q8VFI7 312 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Acot3Q9QYR7 432 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 M1apQ9Z0E1 529 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 AatkQ80YE4 1365 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Sat1P48026 171 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Nol4P60954 483 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Thrap3Q569Z6 951 aaKnown RBP12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Fastkd1Q6DI86 829 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gtf2a1lQ8R4I4 468 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Unc45aQ99KD5 944 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Mbl1P39039 239 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Carmil2Q3V3V9 1296 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 ChukQ60680 745 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Supt20hQ7TT00 530 aaKnown RBP12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Nup107Q8BH74 926 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Kcns3Q8BQZ8 491 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 TwnkQ8CIW5 685 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Chmp1b1Q99LU0 199 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Fam84aQ9D650 292 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Akr1b7P21300 316 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 RalaP63321 206 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Grm1P97772 1199 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Znf746Q3U133 652 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Arhgef7Q9ES28 862 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Casp12O08736 419 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Psmc3O88685 442 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Kcnn2P58390 839 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Odr4Q4PJX1 447 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 XpaQ64267 272 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Gadl1Q80WP8 550 aa12.55□□□□□ -0.4
Trim56-201ENSMUST00000054384 Trpm8Q8R4D5 1104 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms