RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Baiap3Q80TT2 1134 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Psmd6Q99JI4 389 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 FibpQ9JI19 357 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rasgrp1Q9Z1S3 795 aa13.62□□□□□ -0.23
Rnf4-201ENSMUST00000030992 SpoplQ2M2N2 392 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Palb2Q3U0P1 1104 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Wdr41Q3UDP0 460 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tsga10Q6NY15 697 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Phf8Q80TJ7 1023 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Pgm5Q8BZF8 567 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Znf428Q8C1M2 176 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rpn1Q91YQ5 608 aaKnown RBP13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Nxf1Q99JX7 618 aaKnown RBP13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Cnot8Q9D8X5 292 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 MesdQ9ERE7 224 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Pds5aQ6A026 1332 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Abcb11Q9QY30 1321 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Scn10aQ6QIY3 1958 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 DgkhD3YXJ0 1156 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ifnb1P01575 182 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Pon1P52430 355 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 MafbP54841 323 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 NyxP83503 476 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rmdn3Q3UJU9 470 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Miga1Q4QQM5 600 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Adamts18Q4VC17 1219 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 HnrnpdQ60668 355 aaKnown RBP13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Vta1Q9CR26 309 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rnf14Q9JI90 485 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Pdk2Q9JK42 407 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 NinQ61043 2035 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Magea5O89009 320 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Magea8O89012 320 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 P01734 135 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 RxrbP28704 520 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 ZufspQ3T9Z9 577 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Arhgap44Q5SSM3 814 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ppp2r2aQ6P1F6 447 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Magea3Q6T340 320 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 SpopQ6ZWS8 374 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Gm5622Q810Q0 167 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Mageb18Q8BQR7 327 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Zfp446Q8C9M8 523 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Mill1Q8HWE7 395 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Vmn1r64Q8R2B8 320 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ascc2Q91WR3 749 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tnpo2Q99LG2 887 aaKnown RBP13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Gtf2h1Q9DBA9 547 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tll2Q9WVM6 1012 aa13.61□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Myh9Q8VDD5 1960 aaKnown RBP13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Spata31d1dE9Q5W2 1247 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 VegfaQ00731 214 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Serpinb3dQ6UKZ0 387 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ntrk3Q6VNS1 825 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Elmo3Q8BYZ7 720 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 C130026I21RikQ8C898 291 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Scrn2Q8VCA8 425 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Dhx58Q99J87 678 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Usp26Q99MX1 835 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Emc2Q9CRD2 297 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Il21rQ9JHX3 529 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Plcg1Q62077 1302 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 PhipQ8VDD9 1821 aaKnown RBP13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 2210011C24RikA0A087WQ89 206 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Clcn6O35454 870 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 SpibO35906 267 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Mmp10O55123 476 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Rrm1P07742 792 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 L1camP11627 1260 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Xrcc6P23475 608 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 MagohP61327 146 aaKnown RBP13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Pkn1P70268 946 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Fam92bQ3V2J0 292 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Kctd19Q562E2 927 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ccdc92bQ5SUE3 299 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ccdc25Q78PG9 208 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 A430089I19RikQ8C9W1 407 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Nrbp2Q91V36 499 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Bco2Q99NF1 532 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Cep19Q9CQA8 163 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 MagohbQ9CQL1 146 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 RpainQ9CWY9 219 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 AvenQ9D9K3 342 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Cpb2Q9JHH6 422 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 IdeQ9JHR7 1019 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 PorcnQ9JJJ7 461 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Arih1Q9Z1K5 555 aa13.6□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Ttc13A0A1L1SSC7 844 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Trappc3O55013 180 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Mt-CybP00158 381 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Fgl2P12804 432 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Spink5Q148R4 1017 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Q3UTZ3 580 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Odr4Q4PJX1 447 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 AarsQ8BGQ7 968 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Satl1Q9D5N8 744 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Krt17Q9QWL7 433 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Mmrn1B2RPV6 1210 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 AfmO89020 608 aa13.59□□□□□ -0.23
Rnf4-201ENSMUST00000030992 Tmod1P49813 359 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms