RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Sarm1Q6PDS3 724 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 AarsQ8BGQ7 968 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ces3bQ8VCU1 571 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Abcg3Q99P81 650 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Slc22a3Q9WTW5 551 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gemin5Q8BX17 1502 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cyp4f40G3UW81 524 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fam83bQ0VBM2 1012 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Phf8Q80TJ7 1023 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 NcaphQ8C156 731 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tph2Q8CGV2 488 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ugp2Q91ZJ5 508 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ptdss1Q99LH2 473 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Dynll2Q9D0M5 89 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Uchl3Q9JKB1 230 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 PygmQ9WUB3 842 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Mzf1S4R1L6 814 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 4930469K13RikA0A286YDB2 92 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Man1a2P39098 641 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Erp29P57759 262 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Abce1P61222 599 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Edrf1Q6GQV7 1239 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Capn11Q6J756 714 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Lrig3Q6P1C6 1117 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hecw1Q8K4P8 1604 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 TriqkB2B9E1 86 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 ZfrO88532 1074 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cyb5d1Q5NCY3 228 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 FancbQ5XJY6 703 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ints2Q80UK8 1198 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 SybuQ8BHS8 665 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fam20aQ8CID3 541 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Lin7aQ8JZS0 233 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Trim12aQ99PQ1 284 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 SelenovD3YXG1 328 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm17615E9Q9P2 165 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Raph1F2Z3U3 1266 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Serpinb3aG3X9V8 387 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Abi2P62484 446 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 YwhahP68510 246 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Vamp7P70280 220 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 ArsiQ32KI9 573 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 TraddQ3U0V2 310 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Creb3Q61817 404 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 PnocQ64387 187 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Mettl25Q6NXH8 597 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ttc39bQ8BYY4 617 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Trim35Q8C006 501 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tti1Q91V83 1085 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Sun1Q9D666 913 aaKnown RBP10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rasgrp1Q9Z1S3 795 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ccne2Q9Z238 404 aa10.7□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm7356A0A087WSA6 508 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Prr5lA2AVJ5 370 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 CraddO88843 199 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Pstpip1P97814 415 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Epha2Q03145 977 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Calb2Q08331 271 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Grid1Q61627 1009 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Fastkd1Q6DI86 829 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Enoph1Q8BGB7 257 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Map10Q8BJS7 891 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Trim14Q8BVW3 440 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Mill1Q8HWE7 395 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Vmn1r218Q8R261 298 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hao1Q9WU19 370 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Zfp558E9Q1J0 407 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 ItgalP24063 1163 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Atp5bP56480 529 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Klrb1Q0ZUP1 214 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Syce1lQ5D525 247 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Syf2Q9D198 242 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 L3mbtl1A2A5N8 826 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Apol11bE9PUZ0 337 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 UmpsP13439 481 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Scp2P32020 547 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Spc25Q3UA16 226 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Pitpnm3Q3UHE1 974 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Dusp19Q8K4T5 220 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Trim31Q8R0K2 507 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Mccc1Q99MR8 717 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hoxb8P09632 243 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cdh2P15116 906 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Klra9Q2TJJ8 266 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Pcgf5Q3UK78 256 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ccdc134Q8C7V8 229 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gpc5Q8CAL5 572 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 SmapQ9R0P4 181 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rtn2O70622 471 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Psmb9P28076 219 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Eps8Q08509 821 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Nsun7Q14AW5 724 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Lrrc8eQ66JT1 795 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Adgrg6Q6F3F9 1165 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Tbc1d22bQ80VE5 505 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 MtrrQ8C1A3 696 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Sgsm3Q8VCZ6 750 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Hip1Q8VD75 1029 aaKnown RBP10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ercc4Q9QZD4 917 aa10.69□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Usp31E9Q6Y8 1344 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms