RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Rccd1Q8BTU7 377 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Uba6Q8C7R4 1053 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 PawrQ925B0 333 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Chchd3Q9CRB9 227 aaKnown RBP17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cse1lQ9ERK4 971 aaKnown RBP17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Slc26a4Q9R155 780 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Mtmr7Q9Z2C9 660 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Gm5936A2BG95 728 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Gm5640A3KG49 728 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cfap221A9Q751 836 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Axin2O88566 840 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Klrb1Q0ZUP1 214 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cdca2Q14B71 982 aaKnown RBP17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 SpertQ32MG2 446 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ankmy2Q3TPE9 440 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Sec23ipQ6NZC7 998 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Efl1Q8C0D5 1127 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rab44Q8CB87 725 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ddx39aQ8VDW0 427 aaKnown RBP17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Lpgat1Q91YX5 370 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Grhl1Q921D9 618 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Hspbp1Q99P31 357 aaKnown RBP17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Fgfr1op2Q9CRA9 253 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tacc3Q9JJ11 631 aa17.32■□□□□ 0.36
Trim28-201ENSMUST00000005705 GzmgP13366 248 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 RpsaP14206 295 aaKnown RBP17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Shox2P70390 331 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Slc8a1P70414 970 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Sh3gl3Q62421 347 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Srd5a1Q68FF9 255 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tmc3Q7TQ69 1130 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Nemp2Q8CB65 421 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Zcchc8Q9CYA6 709 aaKnown RBP17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Lrrc34Q9DAM1 415 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Gucy1a3Q9ERL9 691 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cyp11b2P15539 500 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Pik3r1P26450 724 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Psen2Q61144 448 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ppp1r13bQ62415 1087 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Mageb18Q8BQR7 327 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Zfp449Q8CB76 518 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rhobtb2Q91V93 728 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Sppl3Q9CUS9 384 aa17.31■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ttll6A4Q9E8 822 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Klrk1O54709 232 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Banf1O54962 89 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 TxkP42682 527 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tigd5Q499M4 642 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Pla2g4eQ50L42 875 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Stxbp2Q64324 593 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Swap70Q6A028 585 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Mrpl2Q9D773 306 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Styxl1Q9DAR2 321 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 PycardQ9EPB4 193 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 IvdQ9JHI5 424 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 VirmaA2AIV2 1811 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 PrphP15331 475 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Gnl1P36916 607 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Msh2P43247 935 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Zfyve27Q3TXX3 415 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Birc2Q62210 612 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Dnajc8Q6NZB0 253 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Xpnpep1Q6P1B1 623 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ttyh3Q6P5F7 524 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Nap1l4Q78ZA7 375 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 MyripQ8K3I4 856 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rnf135Q9CWS1 417 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Pcsk1nQ9QXV0 258 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Nphs1Q9QZS7 1256 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 CatspereP0DP43 985 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 LdhbP16125 334 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Ccdc160Q3UYG1 323 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Klra6Q60653 266 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Zswim5Q80TC6 1188 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 NrcamQ810U4 1256 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Q8BGD0 127 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Sh3rf3Q8C120 878 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 NemfQ8CCP0 1064 aaKnown RBP17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Col23a1Q8K4G2 532 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cnot8Q9D8X5 292 aa17.3■□□□□ 0.36
Trim28-201ENSMUST00000005705 Adcy8P97490 1249 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Tmem117Q8BH18 514 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Wasf2Q8BH43 497 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Actl9Q8CG27 415 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Uroc1Q8VC12 676 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Olfr1502Q8VG66 316 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Slfn14V9GXG1 899 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Rgsl1H3BL40 1073 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Pdk4O70571 412 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 D630036H23RikQ3UQD6 204 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Pick1Q62083 416 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 SnphQ80U23 495 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 C130026I21RikQ8C898 291 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 PpatQ8CIH9 517 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Zbtb44Q8R0A2 453 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 NcaldQ91X97 193 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Cntnap2Q9CPW0 1332 aa17.29■□□□□ 0.36
Trim28-201ENSMUST00000005705 Patl2A2ARM1 529 aa17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Apol8A2VDH7 339 aaKnown RBP17.28■□□□□ 0.36
Trim28-201ENSMUST00000005705 Zfp275G3X904 499 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms