RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SMIM10L2AP0DMW4 78 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 SMIM10L2BP0DMW5 78 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 RAG1P15918 1043 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 TRIM21P19474 475 aaKnown RBP14.27□□□□□ -0.13
PHGDH-221ENST00000641573 MRPS5P82675 430 aaKnown RBP14.27□□□□□ -0.13
PHGDH-221ENST00000641573 FIGNQ5HY92 759 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 MARCH8Q5T0T0 291 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.13
PHGDH-221ENST00000641573 ZSWIM2Q8NEG5 633 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 KIAA1524Q8TCG1 905 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 IQCDQ96DY2 449 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 SAAL1Q96ER3 474 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 NLRP4Q96MN2 994 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 BAG1Q99933 345 aaPredicted RBP14.27□□□□□ -0.13
PHGDH-221ENST00000641573 TARS2Q9BW92 718 aaKnown RBP14.27□□□□□ -0.13
PHGDH-221ENST00000641573 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.13
PHGDH-221ENST00000641573 TTYH3Q9C0H2 523 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 UPF3AQ9H1J1 476 aaKnown RBP14.27□□□□□ -0.13
PHGDH-221ENST00000641573 MMRN2Q9H8L6 949 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 CAPN11Q9UMQ6 739 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 AKT3Q9Y243 479 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 USP20Q9Y2K6 914 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 STYXL1Q9Y6J8 313 aa14.27□□□□□ -0.13
PHGDH-221ENST00000641573 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 MYADML2A6NDP7 307 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 KPNA6O60684 536 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 EDN1P05305 212 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 PRKCBP05771 671 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 CLTBP09497 229 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 C6orf222P0C671 652 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-221ENST00000641573 RARBP10826 455 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 KRT9P35527 623 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 PTENP60484 403 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 TLE2Q04725 743 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 FPGSQ05932 587 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 POU5F1BQ06416 359 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 BFSP1Q12934 665 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 SLFN12LQ6IEE8 588 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 CBWD2Q8IUF1 395 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 TMEM139Q8IV31 216 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 GPD1LQ8N335 351 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 NEK11Q8NG66 645 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 LMBR1Q8WVP7 490 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 TIFAQ96CG3 184 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 ZNF668Q96K58 619 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-221ENST00000641573 FBXL18Q96ME1 805 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 MAP7D2Q96T17 732 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 CRACR2AQ9BSW2 395 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 C1QTNF1Q9BXJ1 281 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 MRPL4Q9BYD3 311 aaKnown RBP14.26□□□□□ -0.13
PHGDH-221ENST00000641573 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 FAM207AQ9NSI2 230 aaPredicted RBP14.26□□□□□ -0.13
PHGDH-221ENST00000641573 LUC7L2Q9Y383 392 aaKnown RBP14.26□□□□□ -0.13
PHGDH-221ENST00000641573 SIP14410 1827 aa14.26□□□□□ -0.13
PHGDH-221ENST00000641573 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 EXTL3O43909 919 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 ZNF500O60304 480 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 VTNP04004 478 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 ADRB2P07550 413 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 TRIM49P0CI25 452 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 TRIM49CP0CI26 452 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 PHKA2P46019 1235 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 VAMP7P51809 220 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 NKX3-2P78367 333 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 PURAQ00577 322 aaKnown RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 SNRNP35Q16560 246 aaKnown RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 MAPK6Q16659 721 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 GNASQ5JWF2 1037 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 ZPBP2Q6X784 338 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 GBP6Q6ZN66 633 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 C17orf53Q8N3J3 647 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 PPP1R13LQ8WUF5 828 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 ZBTB45Q96K62 511 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 MTG1Q9BT17 334 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 NFKBIZQ9BYH8 718 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 FZD8Q9H461 694 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 RRAGDQ9NQL2 400 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-221ENST00000641573 ABHD10Q9NUJ1 306 aa14.25□□□□□ -0.13
PHGDH-221ENST00000641573 A0A087WZ62 844 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 GTPBP10A4D1E9 387 aaKnown RBP14.24□□□□□ -0.13
PHGDH-221ENST00000641573 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 EPHB6O15197 1021 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 ZEB2O60315 1214 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 STX10O60499 249 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 PGK1P00558 417 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 MATR3P43243 847 aaKnown RBP eCLIP14.24□□□□□ -0.13
PHGDH-221ENST00000641573 FMO5P49326 533 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 EPHB4P54760 987 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-221ENST00000641573 DLG4P78352 724 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 ZBED6P86452 979 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 MBTD1Q05BQ5 628 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 EXOC3L4Q17RC7 722 aa14.24□□□□□ -0.13
PHGDH-221ENST00000641573 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-221ENST00000641573 KIAA0319LQ8IZA0 1049 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms