RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 STIM2Q9P246 746 aa16.33■□□□□ 0.21
TRIM3-215ENST00000639856 ASB14A6NK59 587 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 NOP56O00567 594 aaKnown RBP16.33■□□□□ 0.2
TRIM3-215ENST00000639856 KIF4AO95239 1232 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 SLC7A5Q01650 507 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 PPP3CAQ08209 521 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 CETN1Q12798 172 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 HSP90B2PQ58FF3 399 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 FAM160B1Q5W0V3 765 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 KCNV1Q6PIU1 500 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 TAS1R3Q7RTX0 852 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 ASAP3Q8TDY4 903 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 AENQ8WTP8 325 aaKnown RBP16.33■□□□□ 0.2
TRIM3-215ENST00000639856 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 TAF4BQ92750 862 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 MED4Q9NPJ6 270 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 HPCAL4Q9UM19 191 aa16.33■□□□□ 0.2
TRIM3-215ENST00000639856 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 CYP2C19P33261 490 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRIM3-215ENST00000639856 GALCP54803 685 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 RTP1P59025 263 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 TARBP2Q15633 366 aaKnown RBP16.32■□□□□ 0.2
TRIM3-215ENST00000639856 ARHGAP44Q17R89 818 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 SLC39A4Q6P5W5 647 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 GPR142Q7Z601 462 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 SLFN11Q7Z7L1 901 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
TRIM3-215ENST00000639856 FAM71BQ8TC56 605 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 GLG1Q92896 1179 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 CCDC102AQ96A19 550 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 IVNS1ABPQ9Y6Y0 642 aa16.32■□□□□ 0.2
TRIM3-215ENST00000639856 KIF22Q14807 665 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 EPC2Q52LR7 807 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 C1orf220Q5T0J3 134 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 VTI1AQ96AJ9 217 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 HVCN1Q96D96 273 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 GOLPH3Q9H4A6 298 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 AZI2Q9H6S1 392 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.31■□□□□ 0.2
TRIM3-215ENST00000639856 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 EXOC7Q9UPT5 735 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 USP20Q9Y2K6 914 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 A0A0U1RQG5 324 aaPredicted RBP16.31■□□□□ 0.2
TRIM3-215ENST00000639856 KCNK3O14649 394 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 GLRA2P23416 452 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 TNFRSF8P28908 595 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 CNGA1P29973 690 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 GCLMP48507 274 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
TRIM3-215ENST00000639856 MRPS25P82663 173 aaKnown RBP16.31■□□□□ 0.2
TRIM3-215ENST00000639856 DRP2Q13474 957 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 TTLL4Q14679 1199 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 SYCE1Q8N0S2 351 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 SLC7A3Q8WY07 619 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 PBKQ96KB5 322 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 GDAP1L1Q96MZ0 367 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 ARHGAP28Q9P2N2 729 aa16.31■□□□□ 0.2
TRIM3-215ENST00000639856 DOCK3Q8IZD9 2030 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 FOXN3O00409 490 aaPredicted RBP16.3■□□□□ 0.2
TRIM3-215ENST00000639856 PMM2O15305 246 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 LGR5O75473 907 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 ADRB2P07550 413 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 GYS2P54840 703 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 FAM110CQ1W6H9 321 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 TAPT1Q6NXT6 567 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 RASAL3Q86YV0 1011 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 PLEKHO2Q8TD55 490 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 UBE2TQ9NPD8 197 aaPredicted RBP16.3■□□□□ 0.2
TRIM3-215ENST00000639856 NRBP2Q9NSY0 501 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 VPS18Q9P253 973 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 LOC102724159A0A0B4J2E5 919 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
TRIM3-215ENST00000639856 LRRN2O75325 713 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 TMEM253P0C7T8 217 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 TNFAIP3P21580 790 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 ARL2P36404 184 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 ZNF157P51786 506 aaPredicted RBP16.3■□□□□ 0.2
TRIM3-215ENST00000639856 PWP2Q15269 919 aaKnown RBP16.3■□□□□ 0.2
TRIM3-215ENST00000639856 PEX26Q7Z412 305 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 CBWD2Q8IUF1 395 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 ABRAQ8N0Z2 381 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 TMEM59LQ9UK28 342 aa16.3■□□□□ 0.2
TRIM3-215ENST00000639856 NCANO14594 1321 aa16.29■□□□□ 0.2
TRIM3-215ENST00000639856 ZBTB42B2RXF5 422 aa16.29■□□□□ 0.2
TRIM3-215ENST00000639856 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
TRIM3-215ENST00000639856 STRNO43815 780 aa16.29■□□□□ 0.2
TRIM3-215ENST00000639856 MXI1P50539 228 aa16.29■□□□□ 0.2
TRIM3-215ENST00000639856 EPHB4P54760 987 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms