RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 SUSD6Q92537 303 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 CDK5RAP3Q96JB5 506 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 RPGRIP1Q96KN7 1286 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 ZFP42Q96MM3 310 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 NECTIN4Q96NY8 510 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 S1PR5Q9H228 398 aa20.92■□□□□ 0.94
CLN6-213ENST00000636212 LOC730098B7Z3J9 87 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 B4GALT3O60512 393 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 SOD2P04179 222 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 KLRC2P26717 231 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 ATP2C1P98194 919 aaPredicted RBP20.91■□□□□ 0.94
CLN6-213ENST00000636212 PTPN14Q15678 1187 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 ZRSR1Q15695 479 aaKnown RBP20.91■□□□□ 0.94
CLN6-213ENST00000636212 KIAA1841Q6NSI8 718 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 SYCE2Q6PIF2 218 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 ELMSAN1Q6PJG2 1045 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 PHLPP2Q6ZVD8 1323 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 BSNDQ8WZ55 320 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 DRC1Q96MC2 740 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 RIPOR3Q96MK2 946 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 NT5C3AQ9H0P0 336 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 ADAM7Q9H2U9 754 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 NR2E1Q9Y466 385 aa20.91■□□□□ 0.94
CLN6-213ENST00000636212 E9PMD0 336 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 K7ERI5 159 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 MTHFRP42898 656 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 DSC1Q08554 894 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 DCAF4L1Q3SXM0 396 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 HERC4Q5GLZ8 1057 aaPredicted RBP20.9■□□□□ 0.94
CLN6-213ENST00000636212 ARL6IP4Q66PJ3 421 aaKnown RBP20.9■□□□□ 0.94
CLN6-213ENST00000636212 CABP7Q86V35 215 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 KCTD17Q8N5Z5 321 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 HERC2P3Q9BVR0 1158 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 TIPINQ9BVW5 301 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 PDZD7Q9H5P4 517 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 MIOSQ9NXC5 875 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 KLK14Q9P0G3 267 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 MUTYHQ9UIF7 546 aa20.9■□□□□ 0.94
CLN6-213ENST00000636212 CCDC169A6NNP5 214 aa20.89■□□□□ 0.93
CLN6-213ENST00000636212 PP2D1A8MPX8 630 aa20.89■□□□□ 0.93
CLN6-213ENST00000636212 DMP1Q13316 513 aaPredicted RBP20.89■□□□□ 0.93
CLN6-213ENST00000636212 VN1R3Q9BXE9 311 aa20.89■□□□□ 0.93
CLN6-213ENST00000636212 CCDC113Q9H0I3 377 aa20.89■□□□□ 0.93
CLN6-213ENST00000636212 DPP7Q9UHL4 492 aa20.89■□□□□ 0.93
CLN6-213ENST00000636212 KCNG1Q9UIX4 513 aa20.89■□□□□ 0.93
CLN6-213ENST00000636212 VWA3AA6NCI4 1184 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 C2CD2LO14523 706 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 BMP15O95972 392 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 ADH1AP07327 375 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 CDC25AP30304 524 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 GLUD2P49448 558 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 IL17AQ16552 155 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 ATAT1Q5SQI0 421 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 RARS2Q5T160 578 aaKnown RBP20.88■□□□□ 0.93
CLN6-213ENST00000636212 KLHL5Q96PQ7 755 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 KIFC3Q9BVG8 833 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 C17orf75Q9HAS0 396 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 C11orf16Q9NQ32 467 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 MARCH5Q9NX47 278 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 SNTG2Q9NY99 539 aa20.88■□□□□ 0.93
CLN6-213ENST00000636212 RBM19Q9Y4C8 960 aaKnown RBP20.88■□□□□ 0.93
CLN6-213ENST00000636212 TDRD15B5MCY1 1934 aaKnown RBP20.88■□□□□ 0.93
CLN6-213ENST00000636212 HIP1RO75146 1068 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 TADA2AO75478 443 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 THP07101 528 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 EPCAMP16422 314 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 PDCP20941 246 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 PEX3P56589 373 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 ATF7IP2Q5U623 682 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 BRAPQ7Z569 592 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 SLC22A17Q8WUG5 538 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 FBXL18Q96ME1 805 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 SFXN1Q9H9B4 322 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 POLD4Q9HCU8 107 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 KMT5AQ9NQR1 393 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 ADAM28Q9UKQ2 775 aa20.87■□□□□ 0.93
CLN6-213ENST00000636212 CNPP09543 421 aaKnown RBP20.86■□□□□ 0.93
CLN6-213ENST00000636212 CREMQ03060 361 aa20.86■□□□□ 0.93
CLN6-213ENST00000636212 TUSC3Q13454 348 aa20.86■□□□□ 0.93
CLN6-213ENST00000636212 USP41Q3LFD5 358 aa20.86■□□□□ 0.93
CLN6-213ENST00000636212 RINT1Q6NUQ1 792 aa20.86■□□□□ 0.93
CLN6-213ENST00000636212 ZBTB33Q86T24 672 aa20.86■□□□□ 0.93
CLN6-213ENST00000636212 EDAQ92838 391 aa20.86■□□□□ 0.93
CLN6-213ENST00000636212 AK8Q96MA6 479 aa20.86■□□□□ 0.93
CLN6-213ENST00000636212 TTLL13PA6NNM8 815 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 SLC26A4O43511 780 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 RECQL4O94761 1208 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 NPTX2P47972 431 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 CLCN4P51793 760 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 SMTNP53814 917 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 HSP90AA2PQ14568 343 aaPredicted RBP20.85■□□□□ 0.93
CLN6-213ENST00000636212 FUT10Q6P4F1 479 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 GSTCDQ8NEC7 633 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 CALML4Q96GE6 196 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 MMTAG2Q9BU76 263 aaKnown RBP20.85■□□□□ 0.93
CLN6-213ENST00000636212 MRPL4Q9BYD3 311 aaKnown RBP20.85■□□□□ 0.93
CLN6-213ENST00000636212 TMEM134Q9H6X4 195 aa20.85■□□□□ 0.93
CLN6-213ENST00000636212 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.85■□□□□ 0.93
CLN6-213ENST00000636212 TNFSF13BQ9Y275 285 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms