RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SPATS2LQ9NUQ6 558 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 LGALS13Q9UHV8 139 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 PNMA3Q9UL41 463 aa15.87■□□□□ 0.13
CACNA1A-220ENST00000635988 P4HA2O15460 535 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 TRIM49P0CI25 452 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 TRIM49CP0CI26 452 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 CYP2J2P51589 502 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 CCNHP51946 323 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 SETDB1Q15047 1291 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 RHBDF2Q6PJF5 856 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 C1orf186Q6ZWK4 172 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 ZNF720Q7Z2F6 126 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 RPUSD2Q8IZ73 545 aaKnown RBP15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 SLC20A1Q8WUM9 679 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 DCAF4Q8WV16 495 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 SNF8Q96H20 258 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 CCDC77Q9BR77 488 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 DNAJC18Q9H819 358 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 DAGLAQ9Y4D2 1042 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 ADGRA3Q8IWK6 1321 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 SFI1A8K8P3 1242 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 SKAP2O75563 359 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 UFL1O94874 794 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 ZC2HC1CQ53FD0 456 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 AGGF1Q8N302 714 aaeCLIP15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 LMO3Q8TAP4 145 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 GRK7Q8WTQ7 553 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 CCDC17Q96LX7 622 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 UBE2TQ9NPD8 197 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 AAASQ9NRG9 546 aa15.86■□□□□ 0.13
CACNA1A-220ENST00000635988 A8MUI8 341 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 FAM86B1E9PN63 330 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 FSCN2O14926 492 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 MSH4O15457 936 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 EXOC3O60645 756 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 CDH16O75309 829 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 FAM86B2P0C5J1 330 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 KCNJ1P48048 391 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 KRT17Q04695 432 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 TAF11Q15544 211 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 C11orf91Q3C1V1 193 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 INTS8Q75QN2 995 aaKnown RBP15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 FAM178BQ8IXR5 827 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 GDAP1Q8TB36 358 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 RMDN2Q96LZ7 410 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 GPR101Q96P66 508 aaPredicted RBP15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 AMNQ9BXJ7 453 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 ETNK1Q9HBU6 452 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 KCND2Q9NZV8 630 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 ASIC3Q9UHC3 531 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 FOCADQ5VW36 1801 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 TCRBV7S2A1N4TA0A589 114 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 THAP12O43422 761 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 CREB1P16220 341 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 SHMT1P34896 483 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 IL9RQ01113 521 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 SGO2Q562F6 1265 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 ANKRD35Q8N283 1001 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 NAF1Q96HR8 494 aaKnown RBP15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 PITPNM3Q9BZ71 974 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 LRMDAQ9H2I8 198 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 UVRAGQ9P2Y5 699 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 GGA1Q9UJY5 639 aa15.85■□□□□ 0.13
CACNA1A-220ENST00000635988 MPHOSPH10O00566 681 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 GAS8O95995 478 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 MUTP22033 750 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 GPSM2P81274 684 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 COG2Q14746 738 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 CMPK2Q5EBM0 449 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 APLFQ8IW19 511 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 RIBC1Q8N443 379 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 ZNF564Q8TBZ8 553 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 ZNF483Q8TF39 744 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 TMEM237Q96Q45 408 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 HSD17B14Q9BPX1 270 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 BCAS3Q9H6U6 928 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 RGL1Q9NZL6 768 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 A6NHS1 94 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 ABLIM1O14639 778 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 KCNQ2O43526 872 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 CYP1A2P05177 515 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 PTK6Q13882 451 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 STAT4Q14765 748 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 CEP128Q6ZU80 1094 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 ECHDC2Q86YB7 292 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 INPP5DQ92835 1189 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 TRAIPQ9BWF2 469 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 RNPEPL1Q9HAU8 725 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 STARD13Q9Y3M8 1113 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 LRRC42Q9Y546 428 aa15.84■□□□□ 0.13
CACNA1A-220ENST00000635988 TP73O15350 636 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 HLA-DOAP06340 250 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 CYP3A4P08684 503 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 ZNF76P36508 570 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 MPP2Q14168 576 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 SYCP3Q8IZU3 236 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 BBOF1Q8ND07 529 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 FIZ1Q96SL8 496 aa15.83■□□□□ 0.12
CACNA1A-220ENST00000635988 NUP85Q9BW27 656 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms