RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 YDJCA8MPS7 323 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TGFB1I1O43294 461 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 RNF8O76064 485 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 DLATP10515 647 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PSMD6Q15008 389 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PCBP1Q15365 356 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 SGSM1Q2NKQ1 1148 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 KRT71Q3SY84 523 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 LGSNQ5TDP6 509 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC91Q7Z6B0 441 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ROPN1BQ9BZX4 212 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ROPN1Q9HAT0 212 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PRDM10Q9NQV6 1147 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 FAM53CQ9NYF3 392 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 NKIRAS1Q9NYS0 192 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 EML1O00423 815 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PHF2O75151 1096 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 FTLP02792 175 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 METTL7BQ6UX53 244 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 GSTA5Q7RTV2 222 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TAX1BP1Q86VP1 789 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PPM1EQ8WY54 764 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TMEM51Q9NW97 253 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 FAN1Q9Y2M0 1017 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ITGB5P18084 799 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PTPRAP18433 802 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 DUOXA2Q1HG44 320 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 SH3D19Q5HYK7 790 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 CEP85LQ5SZL2 805 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF571Q7Z3V5 609 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 RIOX2Q8IUF8 465 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 SIAH1Q8IUQ4 282 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ZC3H15Q8WU90 426 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 RNPC3Q96LT9 517 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 USP20Q9Y2K6 914 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 COQ4Q9Y3A0 265 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 IKBKGQ9Y6K9 419 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ITIH2P19823 946 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PHBP35232 272 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PLA2G4AP47712 749 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 LACTBP83111 547 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PRKCEQ02156 737 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF484Q5JVG2 852 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 RPUSD2Q8IZ73 545 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 NOA1Q8NC60 698 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 SLC35G2Q8TBE7 412 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TSPAN18Q96SJ8 248 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 FRMD8Q9BZ67 464 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 HPCAL4Q9UM19 191 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 NKRFO15226 690 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 NPTX2P47972 431 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 YARSP54577 528 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ACTR2P61160 394 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 BYSLQ13895 437 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 MESDQ14696 234 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 GADL1Q6ZQY3 521 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ZSWIM1Q9BR11 485 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 LRRC1Q9BTT6 524 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PARVAQ9NVD7 372 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 RBAKQ9NYW8 714 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 HDAC6Q9UBN7 1215 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TJP3O95049 919 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 KRT7P08729 469 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TRIM49P0CI25 452 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 TRIM49CP0CI26 452 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 C4orf22Q6V702 233 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 AENQ8WTP8 325 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 SCFD2Q8WU76 684 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PSMB7Q99436 277 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 GDF3Q9NR23 364 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ADAM22Q9P0K1 906 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 RGS16O15492 202 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ERCC3P19447 782 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 MAP2K1Q02750 393 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ANGEL2Q5VTE6 544 aaKnown RBP4.88□□□□□ -1.63
SCN1A-210ENST00000635776 IRF2BP2Q7Z5L9 587 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 ATP6V1G3Q96LB4 118 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 PCDHB4Q9Y5E5 795 aa4.88□□□□□ -1.63
SCN1A-210ENST00000635776 LRRN2O75325 713 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TOM1L1O75674 476 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ATF2P15336 505 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 HSPA9P38646 679 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TFDP2Q14188 446 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ZC2HC1CQ53FD0 456 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF667Q5HYK9 610 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ACAD10Q6JQN1 1059 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PARD3BQ8TEW8 1205 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ZBED3Q96IU2 234 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RPF1Q9H9Y2 349 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 FBXO28Q9NVF7 368 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PSTPIP1O43586 416 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 SRGAP2O75044 1071 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 KLK7P49862 253 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 SP4Q02446 784 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 SGO2Q562F6 1265 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 DNAJC24Q6P3W2 148 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PNMA8AQ86V59 439 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 KCNN1Q92952 543 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CFAP57Q96MR6 1250 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CGRRF1Q99675 332 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms