RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 PCDHB13Q9Y5F0 798 aa21.71■■□□□ 1.07
CLN8-208ENST00000635751 SMIM35A0A1B0GVV1 85 aa21.71■■□□□ 1.07
CLN8-208ENST00000635751 TMEM161BQ8NDZ6 487 aa21.71■■□□□ 1.07
CLN8-208ENST00000635751 STRA6Q9BX79 667 aa21.71■■□□□ 1.07
CLN8-208ENST00000635751 KCNG1Q9UIX4 513 aa21.71■■□□□ 1.07
CLN8-208ENST00000635751 SIP14410 1827 aa21.71■■□□□ 1.07
CLN8-208ENST00000635751 EIF3DO15371 548 aaKnown RBP eCLIP21.7■■□□□ 1.06
CLN8-208ENST00000635751 ASAP2O43150 1006 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 KRT86O43790 486 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 PPP1R37O75864 691 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 ZRANB2O95218 330 aaKnown RBP eCLIP21.7■■□□□ 1.06
CLN8-208ENST00000635751 HOXD13P35453 343 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 CCDC122Q5T0U0 273 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 RNF149Q8NC42 400 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 SLC17A8Q8NDX2 589 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 DNAJB3Q8WWF6 145 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 JAKMIP2Q96AA8 810 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 NLRP4Q96MN2 994 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 CEP63Q96MT8 703 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 PPP1R16BQ96T49 567 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 ST6GALNAC4Q9H4F1 302 aa21.7■■□□□ 1.06
CLN8-208ENST00000635751 GTF2BQ00403 316 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 STXBP4Q6ZWJ1 553 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 DEPTORQ8TB45 409 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 TRIM10Q9UDY6 481 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 PUF60Q9UHX1 559 aaKnown RBP21.69■■□□□ 1.06
CLN8-208ENST00000635751 PLAGL2Q9UPG8 496 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 FHOD1Q9Y613 1164 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 A0A0U1RQG5 324 aaPredicted RBP21.69■■□□□ 1.06
CLN8-208ENST00000635751 DENND3A2RUS2 1198 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 ATP8B1O43520 1251 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 TMEM62Q0P6H9 643 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 BMT2Q1RMZ1 405 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 EPC1Q9H2F5 836 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 ARHGAP28Q9P2N2 729 aa21.69■■□□□ 1.06
CLN8-208ENST00000635751 GNA14O95837 355 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 PNMA6AP0CW24 399 aaPredicted RBP21.68■■□□□ 1.06
CLN8-208ENST00000635751 ZSCAN20P17040 1043 aaPredicted RBP21.68■■□□□ 1.06
CLN8-208ENST00000635751 GJA8P48165 433 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 MNX1P50219 401 aaPredicted RBP21.68■■□□□ 1.06
CLN8-208ENST00000635751 AMPD2Q01433 879 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 PTPN11Q06124 597 aaPredicted RBP21.68■■□□□ 1.06
CLN8-208ENST00000635751 ALCAMQ13740 583 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 TFDP1Q14186 410 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 PTGISQ16647 500 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 KNOP1Q1ED39 458 aaKnown RBP21.68■■□□□ 1.06
CLN8-208ENST00000635751 CCDC40Q4G0X9 1142 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 PARD6BQ9BYG5 372 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 EDEM3Q9BZQ6 932 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 IKZF4Q9H2S9 585 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 MMRN2Q9H8L6 949 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 FAM207AQ9NSI2 230 aaPredicted RBP21.68■■□□□ 1.06
CLN8-208ENST00000635751 MYO6Q9UM54 1294 aa21.68■■□□□ 1.06
CLN8-208ENST00000635751 NLRP11P59045 1033 aaKnown RBP21.67■■□□□ 1.06
CLN8-208ENST00000635751 SLC43A3Q8NBI5 491 aa21.67■■□□□ 1.06
CLN8-208ENST00000635751 CCDC42Q96M95 316 aa21.67■■□□□ 1.06
CLN8-208ENST00000635751 TSGA10Q9BZW7 698 aa21.67■■□□□ 1.06
CLN8-208ENST00000635751 SENP6Q9GZR1 1112 aaPredicted RBP21.67■■□□□ 1.06
CLN8-208ENST00000635751 KCTD10Q9H3F6 313 aa21.67■■□□□ 1.06
CLN8-208ENST00000635751 TRMT13Q9NUP7 481 aaKnown RBP21.67■■□□□ 1.06
CLN8-208ENST00000635751 TBX20Q9UMR3 447 aa21.67■■□□□ 1.06
CLN8-208ENST00000635751 A0A087WZ62 844 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 H0YCG3 227 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 ARVCFO00192 962 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 GPC3P51654 580 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 SPA17Q15506 151 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 CC2D1AQ6P1N0 951 aaPredicted RBP21.66■■□□□ 1.06
CLN8-208ENST00000635751 TAF2Q6P1X5 1199 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 TAS1R3Q7RTX0 852 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 NEK11Q8NG66 645 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 FDXACB1Q9BRP7 624 aaPredicted RBP21.66■■□□□ 1.06
CLN8-208ENST00000635751 TMEM106CQ9BVX2 250 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 UBE4BO95155 1302 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 CTAGE15A4D2H0 777 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 K7ERI5 159 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 EPHB6O15197 1021 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 CTAGE8P0CG41 777 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 MARSP56192 900 aaKnown RBP21.66■■□□□ 1.06
CLN8-208ENST00000635751 KIZQ2M2Z5 673 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 PPP4R3CPQ6ZMV5 832 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 CTAGE6Q86UF2 777 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 SERINC5Q86VE9 423 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 CTAGE4Q8IX94 777 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 NLRP7Q8WX94 980 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 ACCSQ96QU6 501 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 IFT122Q9HBG6 1241 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 ZMYM2Q9UBW7 1377 aa21.66■■□□□ 1.06
CLN8-208ENST00000635751 VAV2P52735 878 aa21.65■■□□□ 1.06
CLN8-208ENST00000635751 PTENP60484 403 aa21.65■■□□□ 1.06
CLN8-208ENST00000635751 GABPB1Q06547 395 aaPredicted RBP21.65■■□□□ 1.06
CLN8-208ENST00000635751 CDCA2Q69YH5 1023 aaPredicted RBP21.65■■□□□ 1.06
CLN8-208ENST00000635751 ZBTB8OSQ8IWT0 167 aa21.65■■□□□ 1.06
CLN8-208ENST00000635751 SYCP3Q8IZU3 236 aa21.65■■□□□ 1.06
CLN8-208ENST00000635751 WNT8BQ93098 351 aa21.65■■□□□ 1.06
CLN8-208ENST00000635751 NOD1Q9Y239 953 aa21.65■■□□□ 1.06
CLN8-208ENST00000635751 GINS2Q9Y248 185 aa21.65■■□□□ 1.06
CLN8-208ENST00000635751 GPR32O75388 356 aa21.64■■□□□ 1.06
CLN8-208ENST00000635751 POU5F1BQ06416 359 aa21.64■■□□□ 1.06
CLN8-208ENST00000635751 BRD3Q15059 726 aa21.64■■□□□ 1.06
CLN8-208ENST00000635751 EDRF1Q3B7T1 1238 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms