RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NOC3LQ8WTT2 800 aaKnown RBP15.78■□□□□ 0.12
LINC00339-208ENST00000634934 POMGNT1Q8WZA1 660 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 MRFAP1L1Q96HT8 127 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 PCIF1Q9H4Z3 704 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 PDZD7Q9H5P4 517 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 CBX8Q9HC52 389 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 TRAF3IP3Q9Y228 551 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 TNFSF13BQ9Y275 285 aa15.78■□□□□ 0.12
LINC00339-208ENST00000634934 A0A1B0GUA9 196 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 CLDN3O15551 220 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 ZSCAN20P17040 1043 aaPredicted RBP15.77■□□□□ 0.11
LINC00339-208ENST00000634934 RFC2P35250 354 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 CYP2J2P51589 502 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 LRRC63Q05C16 580 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 TPD52L1Q16890 204 aaPredicted RBP15.77■□□□□ 0.11
LINC00339-208ENST00000634934 ZNF568Q3ZCX4 644 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 TWF2Q6IBS0 349 aaKnown RBP15.77■□□□□ 0.11
LINC00339-208ENST00000634934 SLFN12LQ6IEE8 588 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 MFSD5Q6N075 450 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 MPZL3Q6UWV2 235 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 SEPT8Q92599 483 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 CBWD1Q9BRT8 395 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 KCND1Q9NSA2 647 aa15.77■□□□□ 0.11
LINC00339-208ENST00000634934 CGNQ9P2M7 1197 aaKnown RBP15.77■□□□□ 0.11
LINC00339-208ENST00000634934 LAMA2P24043 3122 aaKnown RBP15.77■□□□□ 0.11
LINC00339-208ENST00000634934 NR3C1P04150 777 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 CSF2RAP15509 400 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 ADSSP30520 456 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 ZNF75DP51815 510 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 EPHB4P54760 987 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 SNRPFP62306 86 aaKnown RBP15.76■□□□□ 0.11
LINC00339-208ENST00000634934 SYCP1Q15431 976 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 ZCWPW2Q504Y3 356 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 TTI2Q6NXR4 508 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 SLC27A1Q6PCB7 646 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 AOPEPQ8N6M6 819 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 DBF4BQ8NFT6 615 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 EEF2KMTQ96G04 330 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 MED15Q96RN5 788 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 GDF15Q99988 308 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 LBHD1Q9BQE6 289 aaPredicted RBP15.76■□□□□ 0.11
LINC00339-208ENST00000634934 MSTO1Q9BUK6 570 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 KCNF1Q9H3M0 494 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 TMX1Q9H3N1 280 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 PTPRHQ9HD43 1115 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 CHST12Q9NRB3 414 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 COLQQ9Y215 455 aaPredicted RBP15.76■□□□□ 0.11
LINC00339-208ENST00000634934 SIP14410 1827 aa15.76■□□□□ 0.11
LINC00339-208ENST00000634934 NPTXRO95502 500 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 CXCL10P02778 98 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 IBSPP21815 317 aaPredicted RBP15.75■□□□□ 0.11
LINC00339-208ENST00000634934 GARTP22102 1010 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 PROZP22891 400 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 NR2F2P24468 414 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 RPL13P26373 211 aaKnown RBP15.75■□□□□ 0.11
LINC00339-208ENST00000634934 ADAM9Q13443 819 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 PLEKHG4Q58EX7 1191 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
LINC00339-208ENST00000634934 CSGALNACT2Q8N6G5 542 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 SAAL1Q96ER3 474 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 CCDC51Q96ER9 411 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 DUSP9Q99956 384 aaKnown RBP15.75■□□□□ 0.11
LINC00339-208ENST00000634934 BPIFA3Q9BQP9 254 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 EIF2AQ9BY44 585 aaKnown RBP15.75■□□□□ 0.11
LINC00339-208ENST00000634934 TRIM6Q9C030 488 aaPredicted RBP15.75■□□□□ 0.11
LINC00339-208ENST00000634934 HAPLN2Q9GZV7 340 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 CDT1Q9H211 546 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 HSPBP1Q9NZL4 362 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 AGO2Q9UKV8 859 aaKnown RBP15.75■□□□□ 0.11
LINC00339-208ENST00000634934 STYXL1Q9Y6J8 313 aa15.75■□□□□ 0.11
LINC00339-208ENST00000634934 A0A0B4J269 797 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 GOLGA8IPA6NC78 632 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 GOLGA8JA6NMD2 632 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 BECN2A8MW95 431 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 TULP1O00294 542 aaPredicted RBP15.74■□□□□ 0.11
LINC00339-208ENST00000634934 ABLIM1O14639 778 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 CETN3O15182 167 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 MGEA5O60502 916 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 EXOC3O60645 756 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 FKBP3Q00688 224 aaKnown RBP15.74■□□□□ 0.11
LINC00339-208ENST00000634934 MYL5Q02045 173 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 MCL1Q07820 350 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 IQCB1Q15051 598 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 SPATA1Q5VX52 437 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 THNSL1Q8IYQ7 743 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 ENOX1Q8TC92 643 aaKnown RBP15.74■□□□□ 0.11
LINC00339-208ENST00000634934 APBB2Q92870 758 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 ADAM2Q99965 735 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 SRRTQ9BXP5 876 aaKnown RBP15.74■□□□□ 0.11
LINC00339-208ENST00000634934 PRO3102Q9H379 93 aa15.74■□□□□ 0.11
LINC00339-208ENST00000634934 MCF2P10911 925 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 OSTNP61366 133 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 FPGSQ05932 587 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 DSC3Q14574 896 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 DCAF4L1Q3SXM0 396 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 SEZ6Q53EL9 994 aa15.73■□□□□ 0.11
LINC00339-208ENST00000634934 UBXN11Q5T124 520 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms