RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 TSPEARQ8WU66 669 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 UTP4Q969X6 686 aaKnown RBP5.55□□□□□ -1.52
CDRT1-208ENST00000630868 KIAA1191Q96A73 305 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 SELENOOQ9BVL4 669 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 TRIT1Q9H3H1 467 aaKnown RBP5.55□□□□□ -1.52
CDRT1-208ENST00000630868 POFUT1Q9H488 388 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 DSEQ9UL01 958 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 TELO2Q9Y4R8 837 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 ATP23Q9Y6H3 246 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 X6R8D5 127 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 PDE4DIPQ5VU43 2346 aa5.55□□□□□ -1.52
CDRT1-208ENST00000630868 AFDNP55196 1824 aaKnown RBP5.55□□□□□ -1.52
CDRT1-208ENST00000630868 SOS1Q07889 1333 aaPredicted RBP5.54□□□□□ -1.52
CDRT1-208ENST00000630868 CFAP69A5D8W1 941 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 GNAT3A8MTJ3 354 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 FAM155AB1AL88 458 aaPredicted RBP5.54□□□□□ -1.52
CDRT1-208ENST00000630868 KPNA5O15131 536 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 DTNBO60941 627 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 TBC1D8O95759 1140 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 AGR2O95994 175 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 ABCB4P21439 1286 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 ADMP35318 185 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 FNTBP49356 437 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 NFIXQ14938 502 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 CNN3Q15417 329 aaKnown RBP5.54□□□□□ -1.52
CDRT1-208ENST00000630868 UVSSAQ2YD98 709 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 AMOTQ4VCS5 1084 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 PLEKHO1Q53GL0 409 aaPredicted RBP5.54□□□□□ -1.52
CDRT1-208ENST00000630868 CDKAL1Q5VV42 579 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 RNF111Q6ZNA4 994 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 MMS22LQ6ZRQ5 1243 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 RBM12BQ8IXT5 1001 aaKnown RBP5.54□□□□□ -1.52
CDRT1-208ENST00000630868 SHISA5Q8N114 240 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDRT1-208ENST00000630868 LRTOMTQ8WZ04 291 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 CGRRF1Q99675 332 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 KCTD10Q9H3F6 313 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 FBLN5Q9UBX5 448 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 LIMCH1Q9UPQ0 1083 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 SCINQ9Y6U3 715 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 DICER1Q9UPY3 1922 aaKnown RBP5.54□□□□□ -1.52
CDRT1-208ENST00000630868 TIAM2Q8IVF5 1701 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 CNTNAP1P78357 1384 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 CCDC88AQ3V6T2 1871 aa5.54□□□□□ -1.52
CDRT1-208ENST00000630868 PASKQ96RG2 1323 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 SSU72P8A0A1W2PR75 194 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 PRSS38A1L453 326 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 CAPN8A6NHC0 703 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 CCDC154A6NI56 674 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 FAM90A27PA6NNH2 459 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 C22orf46C9J442 243 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 GNB5O14775 395 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 MAFGO15525 162 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 NCK2O43639 380 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 C4BPAP04003 597 aaKnown RBP5.53□□□□□ -1.52
CDRT1-208ENST00000630868 TNFSF4P23510 183 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 SDHAP31040 664 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 MAN1A1P33908 653 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 CTCFP49711 727 aaPredicted RBP5.53□□□□□ -1.52
CDRT1-208ENST00000630868 CASP5P51878 434 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 SLC5A3P53794 718 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 GEMIN4P57678 1058 aaKnown RBP5.53□□□□□ -1.52
CDRT1-208ENST00000630868 CCT2P78371 535 aaKnown RBP5.53□□□□□ -1.52
CDRT1-208ENST00000630868 TUSC3Q13454 348 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 NKPD1Q17RQ9 610 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 C3orf36Q3SXR2 165 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 ANO6Q4KMQ2 910 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 ZNF530Q6P9A1 599 aaPredicted RBP5.53□□□□□ -1.52
CDRT1-208ENST00000630868 PAOXQ6QHF9 649 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 ESPNLQ6ZVH7 1005 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 TTLL6Q8N841 843 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 C7orf31Q8N865 590 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 PLEKHO2Q8TD55 490 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 AUTS2Q8WXX7 1259 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 CDC5LQ99459 802 aaKnown RBP5.53□□□□□ -1.52
CDRT1-208ENST00000630868 VPS11Q9H270 941 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 SLC6A20Q9NP91 592 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 DPP7Q9UHL4 492 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 NARFQ9UHQ1 456 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 DUSP13Q9UII6 198 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 TMPRSS11EQ9UL52 423 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 CORO2BQ9UQ03 480 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 RWDD3Q9Y3V2 267 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 FER1L6Q2WGJ9 1857 aa5.53□□□□□ -1.52
CDRT1-208ENST00000630868 MRC1P22897 1456 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 LRRC10BA6NIK2 292 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 PRRT4C9JH25 899 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 H3BS24 57 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 HTRA2O43464 458 aaPredicted RBP5.52□□□□□ -1.53
CDRT1-208ENST00000630868 BUB1BO60566 1050 aaPredicted RBP5.52□□□□□ -1.53
CDRT1-208ENST00000630868 TLR5O60602 858 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 DGKIO75912 1065 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 SERPINB2P05120 415 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 CYP19A1P11511 503 aaPredicted RBP5.52□□□□□ -1.53
CDRT1-208ENST00000630868 MTHFD2P13995 350 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 PTPN1P18031 435 aaKnown RBP5.52□□□□□ -1.53
CDRT1-208ENST00000630868 PPM1AP35813 382 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 GRK6P43250 576 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 MTHFSP49914 203 aa5.52□□□□□ -1.53
CDRT1-208ENST00000630868 SLC16A1P53985 500 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms