RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DTNBO60941 627 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 PLEKHA8P1O95397 391 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 INSRRP14616 1297 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 MTMR1Q13613 665 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 GRM4Q14833 912 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 LARP1BQ659C4 914 aaKnown RBP5.42□□□□□ -1.54
LINC00550-201ENST00000629293 LLGL2Q6P1M3 1020 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 ADGRD2Q7Z7M1 963 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 MICU3Q86XE3 530 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 CKAP2LQ8IYA6 745 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 FAM169BQ8N8A8 192 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 PHC3Q8NDX5 983 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 POF1BQ8WVV4 589 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 SPON2Q9BUD6 331 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 TLE6Q9H808 572 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 PSTPIP2Q9H939 334 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 FAM13BQ9NYF5 915 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 HCSTQ9UBK5 93 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 CD207Q9UJ71 328 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 NRCAMQ92823 1304 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 DMDP11532 3685 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 CCDC69A6NI79 296 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 E7EWF7 191 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 MBTPS2O43462 519 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 PCSK2P16519 638 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 KRT85P78386 507 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 RELBQ01201 579 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 EXOSC10Q01780 885 aaKnown RBP5.42□□□□□ -1.54
LINC00550-201ENST00000629293 RESTQ13127 1097 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 TAF2Q6P1X5 1199 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 THNSL1Q8IYQ7 743 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 HNRNPLLQ8WVV9 542 aaKnown RBP5.42□□□□□ -1.54
LINC00550-201ENST00000629293 SEPT1Q8WYJ6 367 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 APBB2Q92870 758 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 MFSD14AQ96MC6 490 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 POP1Q99575 1024 aaKnown RBP5.42□□□□□ -1.54
LINC00550-201ENST00000629293 NEUROD4Q9HD90 331 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 ERAP1Q9NZ08 941 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 TCEAL9Q9UHQ7 104 aa5.42□□□□□ -1.54
LINC00550-201ENST00000629293 DENND3A2RUS2 1198 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TBKBP1A7MCY6 615 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PFKFB2O60825 505 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 ITGB1P05556 798 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 HOXD8P13378 290 aaPredicted RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 MSNP26038 577 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 KIF5BP33176 963 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 EIF4A3P38919 411 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PBX3P40426 434 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 APOBRQ0VD83 1088 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TROAPQ12815 778 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 FBXO47Q5MNV8 452 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 RBM43Q6ZSC3 357 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 Q6ZUG5 572 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 LILRB2Q8N423 598 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 FBXL16Q8N461 479 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 METTL13Q8N6R0 699 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 CELF2-AS1Q8N7Q2 184 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 CYP2W1Q8TAV3 490 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 LLPHQ9BRT6 129 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 RIOX1Q9H6W3 641 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PADI3Q9ULW8 664 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PLAGL2Q9UPG8 496 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TLR6Q9Y2C9 796 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TANC1Q9C0D5 1861 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PTPRSQ13332 1948 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 JAK2O60674 1132 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PHACTR2O75167 634 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 DNAJB1P25685 340 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 GSTT1P30711 240 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 MRPS6P82932 125 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 SMAD2Q15796 467 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PLPP4Q5VZY2 271 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PCNX4Q63HM2 1172 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 ANKS3Q6ZW76 656 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 SCLT1Q96NL6 688 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 NAP1L5Q96NT1 182 aaPredicted RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TMEM260Q9NX78 707 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 KLHL42Q9P2K6 505 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 CDH22Q9UJ99 828 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 EFR3BQ9Y2G0 817 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TTC3P53804 2025 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 KIAA1217Q5T5P2 1943 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 J3QL48 77 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PRC1O43663 620 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 RB1P06400 928 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 SCG2P13521 617 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 ITGB5P18084 799 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 CTSOP43234 321 aaPredicted RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TERF1P54274 439 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 SCRN1Q12765 414 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 PLCB4Q15147 1175 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 KIZQ2M2Z5 673 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 LONRF3Q496Y0 759 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TMEM214Q6NUQ4 689 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 POTEGQ6S5H5 508 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 TSHZ1Q6ZSZ6 1077 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 DHX32Q7L7V1 743 aaKnown RBP5.41□□□□□ -1.54
LINC00550-201ENST00000629293 MTMR8Q96EF0 704 aa5.41□□□□□ -1.54
LINC00550-201ENST00000629293 SMARCAD1Q9H4L7 1026 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms