RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 TRIM8Q9BZR9 551 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 TLR7Q9NYK1 1049 aaKnown RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 TMOD3Q9NYL9 352 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 EPS15L1Q9UBC2 864 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 CRNNQ9UBG3 495 aaPredicted RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 PGAP2Q9UHJ9 254 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 SAP30BPQ9UHR5 308 aaKnown RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 ATP6V1DQ9Y5K8 247 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 NR2E3Q9Y5X4 410 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 SZT2Q5T011 3432 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 UBN2Q6ZU65 1347 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 LTBP3Q9NS15 1303 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 FER1L6Q2WGJ9 1857 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 CCDC163A0A0D9SF12 145 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 NDC80O14777 642 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 EIF3HO15372 352 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMN2-214ENST00000626847 PRPF3O43395 683 aaKnown RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 FBXO21O94952 628 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 LCA5LO95447 670 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 S100BP04271 92 aaPredicted RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 CLTAP09496 248 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 CD33P20138 364 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 THOP1P52888 689 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 EVCP57679 992 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 KRT83P78385 493 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 KCNMA1Q12791 1236 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 GRIN2CQ14957 1233 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 INSCQ1MX18 579 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 ARMC4Q5T2S8 1044 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 IL23RQ5VWK5 629 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 PEAR1Q5VY43 1037 aaPredicted RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 CIAPIN1Q6FI81 312 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 RAB44Q7Z6P3 723 aaPredicted RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 PNMA8AQ86V59 439 aaPredicted RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 EXOC3L1Q86VI1 746 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 CAND1Q86VP6 1230 aaKnown RBP8.97□□□□□ -0.97
SMN2-214ENST00000626847 C2CD5Q86YS7 1000 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 USP38Q8NB14 1042 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 SPATA18Q8TC71 538 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 NCSTNQ92542 709 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 OSBP2Q969R2 916 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 MED30Q96HR3 178 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 GMCL1Q96IK5 515 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 CCDC42Q96M95 316 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 MPHOSPH8Q99549 860 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 OSMRQ99650 979 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 NUF2Q9BZD4 464 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 TRPV6Q9H1D0 765 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 FAM204AQ9H8W3 233 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 C12orf10Q9HB07 376 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 PDE11AQ9HCR9 933 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 RAB21Q9UL25 225 aa8.97□□□□□ -0.97
SMN2-214ENST00000626847 A0A0C4DFX4 3053 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 MYH14Q7Z406 1995 aaKnown RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 BTBD19C9JJ37 291 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 ANKRD65E5RJM6 399 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 E7ENQ6 273 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 IFRD1O00458 451 aaPredicted RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 SUPT3HO75486 399 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 CCDC192P0DO97 292 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 GHRP10912 638 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 XRCC5P13010 732 aaKnown RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 EIF2S2P20042 333 aaKnown RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 IL32P24001 234 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 SOX18P35713 384 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 TRAPPC10P48553 1259 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 CENPAP49450 140 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 IRAK1P51617 712 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 BPIFB4P59827 614 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 LAPTM5Q13571 262 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 CCDC85BQ15834 202 aaPredicted RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 WDR45BQ5MNZ6 344 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 DEPDC1Q5TB30 811 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 LMBRD2Q68DH5 695 aaPredicted RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 ZNF449Q6P9G9 518 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 VPS36Q86VN1 386 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 FAM20CQ8IXL6 584 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 CKAP2LQ8IYA6 745 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 GLIS3Q8NEA6 775 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 BCAS4Q8TDM0 211 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 GTPBP3Q969Y2 492 aaKnown RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 FGD4Q96M96 766 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 TUBGCP5Q96RT8 1024 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 SLC30A3Q99726 388 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 BPIFA3Q9BQP9 254 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 OSBPL1AQ9BXW6 950 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 DNAJC18Q9H819 358 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 BRD9Q9H8M2 597 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 CD93Q9NPY3 652 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 AVENQ9NQS1 362 aaPredicted RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 MOCS1Q9NZB8 636 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 GMPR2Q9P2T1 348 aaKnown RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 FBXL5Q9UKA1 691 aa8.96□□□□□ -0.98
SMN2-214ENST00000626847 ATXN7L1Q9ULK2 861 aaPredicted RBP8.96□□□□□ -0.98
SMN2-214ENST00000626847 COL5A3P25940 1745 aaPredicted RBP8.95□□□□□ -0.98
SMN2-214ENST00000626847 ZNF541Q9H0D2 1346 aa8.95□□□□□ -0.98
SMN2-214ENST00000626847 TRIM64A6NGJ6 449 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms