RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 AKAP3O75969 853 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 T-ENOLP0DO92 83 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 RARGP13631 454 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 ASIC3Q9UHC3 531 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 DCTN4Q9UJW0 460 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 A0A1W2PRG0 241 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 DLATP10515 647 aaKnown RBP23.24■■□□□ 1.31
PCSK6-220ENST00000622483 TAF1BQ53T94 588 aaPredicted RBP23.24■■□□□ 1.31
PCSK6-220ENST00000622483 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.24■■□□□ 1.31
PCSK6-220ENST00000622483 RBBP8NLQ8NC74 664 aaPredicted RBP23.24■■□□□ 1.31
PCSK6-220ENST00000622483 C9orf72Q96LT7 481 aa23.24■■□□□ 1.31
PCSK6-220ENST00000622483 BMP2KQ9NSY1 1161 aaPredicted RBP23.24■■□□□ 1.31
PCSK6-220ENST00000622483 FRMPD2Q68DX3 1309 aaPredicted RBP23.23■■□□□ 1.31
PCSK6-220ENST00000622483 WDR91A4D1P6 747 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 G3V3G9 751 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 VCAM1P19320 739 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 GSTT1P30711 240 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 SCNN1DP51172 638 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 CALCOCO2Q13137 446 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 TMED2Q15363 201 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 MTFR1Q15390 333 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 SLC15A2Q16348 729 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 DCAF8Q5TAQ9 597 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 CNOT7Q9UIV1 285 aaKnown RBP23.23■■□□□ 1.31
PCSK6-220ENST00000622483 FAM187AA6NFU0 413 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 PPEF1O14829 653 aaPredicted RBP23.23■■□□□ 1.31
PCSK6-220ENST00000622483 PHF2O75151 1096 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 CHRNB2P17787 502 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 KIAA0825Q8IV33 1275 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 ATG4AQ8WYN0 398 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 RFFLQ8WZ73 363 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 DYDC2Q96IM9 177 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 GBP5Q96PP8 586 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 TMEM47Q9BQJ4 181 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 LRMDAQ9H2I8 198 aa23.23■■□□□ 1.31
PCSK6-220ENST00000622483 STAT3P40763 770 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 DHX34Q14147 1143 aaKnown RBP23.22■■□□□ 1.31
PCSK6-220ENST00000622483 GRM4Q14833 912 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 CYP4F22Q6NT55 531 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 ZNF333Q96JL9 665 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 KCTD10Q9H3F6 313 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 SFI1A8K8P3 1242 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 CAPN9O14815 690 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 PIAS1O75925 651 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 PYGMP11217 842 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 YY1P25490 414 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 HHATQ5VTY9 493 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 DPY19L2P1Q6NXN4 242 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 NSUN4Q96CB9 384 aaKnown RBP23.22■■□□□ 1.31
PCSK6-220ENST00000622483 PHTF1Q9UMS5 762 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 THAP12O43422 761 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 SPATA31D3P0C874 917 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 ACADSP16219 412 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 STAT1P42224 750 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 GNAQP50148 359 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 POLGP54098 1239 aaPredicted RBP23.22■■□□□ 1.31
PCSK6-220ENST00000622483 LBRQ14739 615 aaKnown RBP23.22■■□□□ 1.31
PCSK6-220ENST00000622483 SPATA31D4Q6ZUB0 917 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 CEP63Q96MT8 703 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 MTMR9Q96QG7 549 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 CRNKL1Q9BZJ0 848 aaKnown RBP23.22■■□□□ 1.31
PCSK6-220ENST00000622483 CARD9Q9H257 536 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 NUMBLQ9Y6R0 609 aa23.22■■□□□ 1.31
PCSK6-220ENST00000622483 OVGP1Q12889 678 aa23.21■■□□□ 1.31
PCSK6-220ENST00000622483 ISLR2Q6UXK2 745 aa23.21■■□□□ 1.31
PCSK6-220ENST00000622483 AAASQ9NRG9 546 aa23.21■■□□□ 1.31
PCSK6-220ENST00000622483 BZW2Q9Y6E2 419 aaKnown RBP23.21■■□□□ 1.31
PCSK6-220ENST00000622483 FGRP09769 529 aa23.21■■□□□ 1.31
PCSK6-220ENST00000622483 WDR4P57081 412 aaKnown RBP23.21■■□□□ 1.31
PCSK6-220ENST00000622483 KPNB1Q14974 876 aaKnown RBP23.21■■□□□ 1.31
PCSK6-220ENST00000622483 C4orf33Q8N1A6 199 aa23.21■■□□□ 1.31
PCSK6-220ENST00000622483 FAM136AQ96C01 138 aa23.21■■□□□ 1.31
PCSK6-220ENST00000622483 CD209Q9NNX6 404 aa23.21■■□□□ 1.31
PCSK6-220ENST00000622483 SEC63Q9UGP8 760 aaKnown RBP23.21■■□□□ 1.31
PCSK6-220ENST00000622483 RASA4BC9J798 803 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 RASA4O43374 803 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 MFSD14BQ5SR56 506 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 RNF43Q68DV7 783 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 MOV10L1Q9BXT6 1211 aaKnown RBP23.2■■□□□ 1.3
PCSK6-220ENST00000622483 PCDHAC2Q9Y5I4 1007 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 NEK3P51956 506 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 CRY2Q49AN0 593 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 TNFAIP8L3Q5GJ75 292 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 NDNQ99608 321 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 MIPEPQ99797 713 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 SIX2Q9NPC8 291 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 UBN1Q9NPG3 1134 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 RHBDL2Q9NX52 303 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 NAALADL1Q9UQQ1 740 aa23.2■■□□□ 1.3
PCSK6-220ENST00000622483 WFS1O76024 890 aa23.19■■□□□ 1.3
PCSK6-220ENST00000622483 GNA11P29992 359 aa23.19■■□□□ 1.3
PCSK6-220ENST00000622483 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
PCSK6-220ENST00000622483 DRAP1Q14919 205 aaPredicted RBP23.19■■□□□ 1.3
PCSK6-220ENST00000622483 BTNL9Q6UXG8 535 aa23.19■■□□□ 1.3
PCSK6-220ENST00000622483 CCDC65Q8IXS2 484 aa23.19■■□□□ 1.3
PCSK6-220ENST00000622483 AGGF1Q8N302 714 aaeCLIP23.19■■□□□ 1.39e-9■■■■□ 24.8
PCSK6-220ENST00000622483 ZNF513Q8N8E2 541 aaPredicted RBP23.19■■□□□ 1.3
PCSK6-220ENST00000622483 CAMKK2Q96RR4 588 aa23.19■■□□□ 1.3
PCSK6-220ENST00000622483 STK32BQ9NY57 414 aa23.19■■□□□ 1.3
PCSK6-220ENST00000622483 WASF2Q9Y6W5 498 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms