RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TERF1P54274 439 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 PTENP60484 403 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 TMEM132AQ24JP5 1023 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 KRT39Q6A163 491 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 LMO3Q8TAP4 145 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 TCHPQ9BT92 498 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 STK33Q9BYT3 514 aa23.27■■□□□ 1.32
SPAST-204ENST00000621856 INO80BQ9C086 356 aaPredicted RBP23.27■■□□□ 1.32
SPAST-204ENST00000621856 RIOK3O14730 519 aaKnown RBP23.26■■□□□ 1.31
SPAST-204ENST00000621856 RFX1P22670 979 aa23.26■■□□□ 1.31
SPAST-204ENST00000621856 PSMD6Q15008 389 aa23.26■■□□□ 1.31
SPAST-204ENST00000621856 ZBTB33Q86T24 672 aa23.26■■□□□ 1.31
SPAST-204ENST00000621856 LINC01465Q8N7H1 131 aa23.26■■□□□ 1.31
SPAST-204ENST00000621856 FNBP1Q96RU3 617 aa23.26■■□□□ 1.31
SPAST-204ENST00000621856 ACO2Q99798 780 aaKnown RBP23.26■■□□□ 1.31
SPAST-204ENST00000621856 ARHGAP39Q9C0H5 1083 aa23.26■■□□□ 1.31
SPAST-204ENST00000621856 HAUS4Q9H6D7 363 aa23.26■■□□□ 1.31
SPAST-204ENST00000621856 TTLL13PA6NNM8 815 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 ZNF263O14978 683 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 TOM1L1O75674 476 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 LCA5LO95447 670 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 FERP16591 822 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 CPT1AP50416 773 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 DRAP1Q14919 205 aaPredicted RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 CCDC122Q5T0U0 273 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 IRF2BP2Q7Z5L9 587 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 IRX2Q9BZI1 471 aaPredicted RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 RBAKQ9NYW8 714 aaPredicted RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 PCDHA13Q9Y5I0 950 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 BZW2Q9Y6E2 419 aaKnown RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 VAV2P52735 878 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 LACTBP83111 547 aaPredicted RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 GFPT1Q06210 699 aaPredicted RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 PRPF4BQ13523 1007 aaKnown RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 ARHGAP44Q17R89 818 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 ASTE1Q2TB18 679 aaPredicted RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 ZNF569Q5MCW4 686 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 PHLDB3Q6NSJ2 640 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 CAPNS2Q96L46 248 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 WDR24Q96S15 920 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 MAP7D2Q96T17 732 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 PPP1R16BQ96T49 567 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.25■■□□□ 1.31
SPAST-204ENST00000621856 IFIH1Q9BYX4 1025 aaKnown RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 FZD8Q9H461 694 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 UBE2TQ9NPD8 197 aaPredicted RBP23.25■■□□□ 1.31
SPAST-204ENST00000621856 TRIM10Q9UDY6 481 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 GUCA1BQ9UMX6 200 aa23.25■■□□□ 1.31
SPAST-204ENST00000621856 RRN3P2A6NIE6 340 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 F8VZ95 297 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 ACKR2O00590 384 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 KRT86O43790 486 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 GFPT2O94808 682 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 ABL1P00519 1130 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 IGHA2P01877 340 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 VTNP04004 478 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 SOX5P35711 763 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 MBTD1Q05BQ5 628 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 DEFB115Q30KQ5 88 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 ZBTB41Q5SVQ8 909 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 CRELD2Q6UXH1 353 aaPredicted RBP23.24■■□□□ 1.31
SPAST-204ENST00000621856 ZNF662Q6ZS27 426 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 MYRIPQ8NFW9 859 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 NFKBIZQ9BYH8 718 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 TFR2Q9UP52 801 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 Q9Y3F1 56 aa23.24■■□□□ 1.31
SPAST-204ENST00000621856 A0A087WZ62 844 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 F2P00734 622 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 MYL3P08590 195 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 PNMA6AP0CW24 399 aaPredicted RBP23.23■■□□□ 1.31
SPAST-204ENST00000621856 TNNI1P19237 187 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 POU5F1BQ06416 359 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 KIAA0753Q2KHM9 967 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 MFSD14CQ5VZR4 134 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 FMNL3Q8IVF7 1028 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 ARHGEF19Q8IW93 802 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 SCLT1Q96NL6 688 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 FDXACB1Q9BRP7 624 aaPredicted RBP23.23■■□□□ 1.31
SPAST-204ENST00000621856 TSGA10Q9BZW7 698 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 SETD4Q9NVD3 440 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 GABRQQ9UN88 632 aa23.23■■□□□ 1.31
SPAST-204ENST00000621856 UQCRHLA0A096LP55 91 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 TBC1D8O95759 1140 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 UQCRHP07919 91 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 AKR1A1P14550 325 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 PRKCIP41743 596 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 MAGEA1P43355 309 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 IRX5P78411 483 aaPredicted RBP23.22■■□□□ 1.31
SPAST-204ENST00000621856 KIF5AQ12840 1032 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 MFSD10Q14728 455 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 MARCH8Q5T0T0 291 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 ATF7IP2Q5U623 682 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 SV2AQ7L0J3 742 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 FBXL13Q8NEE6 735 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 SEMA4DQ92854 862 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 VTI1AQ96AJ9 217 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 PDE11AQ9HCR9 933 aa23.22■■□□□ 1.31
SPAST-204ENST00000621856 LUC7LQ9NQ29 371 aaKnown RBP23.22■■□□□ 1.31
SPAST-204ENST00000621856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.22■■□□□ 1.316e-6■■■■■ 48.1
SPAST-204ENST00000621856 PRMT7Q9NVM4 692 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms