RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ZNF233A6NK53 670 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 AFPP02771 609 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 GSTA1P08263 222 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 GSTA2P09210 222 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 YWHAEP62258 255 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 COG2Q14746 738 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 SHROOM1Q2M3G4 852 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 NXNQ6DKJ4 435 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 GJB7Q6PEY0 223 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 TADA2BQ86TJ2 420 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 METTL23Q86XA0 190 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 LRRC71Q8N4P6 559 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 PSPC1Q8WXF1 523 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 DDX47Q9H0S4 455 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 KCNG1Q9UIX4 513 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 CPSF3Q9UKF6 684 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 STRCQ7RTU9 1775 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 RSPH10B2B2RC85 870 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 RSPH10BP0C881 870 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 UCHL3P15374 230 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 BASP1P80723 227 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 TMEM270Q6UE05 265 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 KDELC2Q7Z4H8 507 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 CATSPER3Q86XQ3 398 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 OR2W6PQ8NHA6 318 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 SCYL1Q96KG9 808 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 SAMD15Q9P1V8 674 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 PLAAQ9Y263 795 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 COL16A1Q07092 1604 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 WDR64B1ANS9 1081 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 PGK2P07205 417 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 GYS1P13807 737 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 NR1D1P20393 614 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 ACOT2P49753 483 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 MFAP3P55082 362 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 TPD52P55327 224 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 NPEPPSP55786 919 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 SLC20A2Q08357 652 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 SEPT6Q14141 434 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 MEI1Q5TIA1 1274 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 MCTP2Q6DN12 878 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 CCDC121Q6ZUS5 278 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF571Q7Z3V5 609 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 PNMA8AQ86V59 439 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 VSIG1Q86XK7 387 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 VPS52Q8N1B4 723 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 PPP4R1Q8TF05 950 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 JPH2Q9BR39 696 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 REEP2Q9BRK0 252 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 LXNQ9BS40 222 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 SPON2Q9BUD6 331 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 ACAD9Q9H845 621 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 KCNQ5Q9NR82 932 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 STK24Q9Y6E0 443 aa8.85□□□□□ -0.99
PTPDC1-204ENST00000620992 POLRMTO00411 1230 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 XPOTO43592 962 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 NMT1P30419 496 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 KNOP1Q1ED39 458 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 SYCP2LQ5T4T6 812 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 PPP1R18Q6NYC8 613 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 APOBEC3FQ8IUX4 373 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 CAVIN3Q969G5 261 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 RNPC3Q96LT9 517 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 NSRP1Q9H0G5 558 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 HACL1Q9UJ83 578 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 A0A087WUV0 522 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 SHMT1P34896 483 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 CTNNA1P35221 906 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 CASP4P49662 377 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 PLTPP55058 493 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 TTLL4Q14679 1199 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 PLA2G4FQ68DD2 849 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 DNAJC24Q6P3W2 148 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 USP38Q8NB14 1042 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 GIMAP7Q8NHV1 300 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 SYN2Q92777 582 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 ADAM33Q9BZ11 813 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 CCDC68Q9H2F9 335 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 PIDD1Q9HB75 910 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 MYOZ2Q9NPC6 264 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 PNMA2Q9UL42 364 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 HEY1Q9Y5J3 304 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 GAKO14976 1311 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 NAV1Q8NEY1 1877 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 GOLGB1Q14789 3259 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 H0YCG3 227 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 C2CD2LO14523 706 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 EPHB1P54762 984 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 RPS6KA2Q15349 733 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF667Q5HYK9 610 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 STRIP1Q5VSL9 837 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 INTS8Q75QN2 995 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 ZNF572Q7Z3I7 529 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 ANKS4BQ8N8V4 417 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 HSPH1Q92598 858 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 RUBCNQ92622 972 aa8.84□□□□□ -0.99
PTPDC1-204ENST00000620992 FAM163AQ96GL9 167 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms