RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 STRIP1Q5VSL9 837 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 UBL4BQ8N7F7 174 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 C3orf20Q8ND61 904 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 KLHL14Q9P2G3 628 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 HAO1Q9UJM8 370 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 STXBP5LQ9Y2K9 1186 aa7.45□□□□□ -1.22
NEDD9-216ENST00000620854 COL14A1Q05707 1796 aaKnown RBP7.45□□□□□ -1.22
NEDD9-216ENST00000620854 TISP43B9A030 160 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 CLDN3O15551 220 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 AP1G2O75843 785 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 DPEP1P16444 411 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 FERP16591 822 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 ATP2A2P16615 1042 aaKnown RBP7.44□□□□□ -1.22
NEDD9-216ENST00000620854 ALDH3A1P30838 453 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 ADCY2Q08462 1091 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 RFX8Q6ZV50 586 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SPATA21Q7Z572 469 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 RASGEF1CQ8N431 466 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SLC30A5Q8TAD4 765 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 CDC42EP4Q9H3Q1 356 aaKnown RBP7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SIX2Q9NPC8 291 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.44□□□□□ -1.221e-6■■■□□ 15.8
NEDD9-216ENST00000620854 NKX1-2Q9UD57 310 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-216ENST00000620854 COMMD10Q9Y6G5 202 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 WDR91A4D1P6 747 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 HIP1RO75146 1068 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 STAMBPO95630 424 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 MYCLP12524 364 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-216ENST00000620854 CHKAP35790 457 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 DNAJC3Q13217 504 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 EPC2Q52LR7 807 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 FRMD5Q7Z6J6 570 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 CYP4X1Q8N118 509 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 KAT5Q92993 513 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 PGM2Q96G03 612 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 PITPNM3Q9BZ71 974 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SLCO1B3Q9NPD5 702 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 MTMR4Q9NYA4 1195 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 GRHL1Q9NZI5 618 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 ZNRF3Q9ULT6 936 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 TIAM2Q8IVF5 1701 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SRRM3A6NNA2 597 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-216ENST00000620854 THAP12O43422 761 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 AGTP01019 485 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 RAD23BP54727 409 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 PPP1R21Q6ZMI0 780 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 MIGA2Q7L4E1 593 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SLFN11Q7Z7L1 901 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 P3H4Q92791 437 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 CCDC127Q96BQ5 260 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 ERP27Q96DN0 273 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 RIOX1Q9H6W3 641 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 EBF2Q9HAK2 575 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 KCNQ5Q9NR82 932 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 SPATS2LQ9NUQ6 558 aaKnown RBP7.44□□□□□ -1.22
NEDD9-216ENST00000620854 ADAM22Q9P0K1 906 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 PFASO15067 1338 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 NUP98P52948 1817 aa7.44□□□□□ -1.22
NEDD9-216ENST00000620854 PNMA6FA0A0J9YX94 578 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 POLRMTO00411 1230 aaKnown RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 LMNB1P20700 586 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 SSTR3P32745 418 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ARL1P40616 181 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 GCLMP48507 274 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 SLC12A3P55017 1021 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF268Q14587 947 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ITIH4Q14624 930 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 EDRF1Q3B7T1 1238 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF483Q8TF39 744 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ZNF526Q8TF50 670 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 FAM84AQ96KN4 292 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 IFT74Q96LB3 600 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 OSBPL1AQ9BXW6 950 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 CARD9Q9H257 536 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 KCNG1Q9UIX4 513 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 INTUQ9ULD6 942 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 AGTPBP1Q9UPW5 1226 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 POC1B-GALNT4F8VUJ3 575 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 SMIM24O75264 130 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ZBTB48P10074 688 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ADCY8P40145 1251 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 FAM182AQ5T1J6 154 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 METTL5Q9NRN9 209 aaKnown RBP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 RNF181Q9P0P0 153 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 GINS2Q9Y248 185 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.43□□□□□ -1.22
NEDD9-216ENST00000620854 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 CFAP73A6NFT4 308 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 CES2O00748 559 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 ENTPD5O75356 428 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 CBX6O95503 412 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 NUDT17P0C025 328 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 KCNA4P22459 653 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 FMO5P49326 533 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 DLG4P78352 724 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 TMED2Q15363 201 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 PHLDB3Q6NSJ2 640 aa7.43□□□□□ -1.22
NEDD9-216ENST00000620854 TMEM179Q6ZVK1 233 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms