RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 GRIK3Q13003 919 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 SMAD4Q13485 552 aaKnown RBP16.8■□□□□ 0.28
C9orf50-202ENST00000619117 KCNC3Q14003 757 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 BMS1Q14692 1282 aaKnown RBP16.8■□□□□ 0.28
C9orf50-202ENST00000619117 NT5DC1Q5TFE4 455 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 ATF7IP2Q5U623 682 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 EEF1DP3Q658K8 133 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 FAM173BQ6P4H8 233 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 VPS52Q8N1B4 723 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 MRPL43Q8N983 215 aaKnown RBP16.8■□□□□ 0.28
C9orf50-202ENST00000619117 GSTCDQ8NEC7 633 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 VN1R2Q8NFZ6 395 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 LRRC15Q8TF66 581 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 SPIRE2Q8WWL2 714 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 NTPCRQ9BSD7 190 aaKnown RBP16.8■□□□□ 0.28
C9orf50-202ENST00000619117 VN1R3Q9BXE9 311 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 CCSER1Q9C0I3 900 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 KMT5AQ9NQR1 393 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 CD207Q9UJ71 328 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 FBXO2Q9UK22 296 aaPredicted RBP16.8■□□□□ 0.28
C9orf50-202ENST00000619117 TNFSF13BQ9Y275 285 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 SRPRBQ9Y5M8 271 aaKnown RBP16.8■□□□□ 0.28
C9orf50-202ENST00000619117 IRAK3Q9Y616 596 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 BDP1A6H8Y1 2624 aa16.8■□□□□ 0.28
C9orf50-202ENST00000619117 NRP1O14786 923 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 ALDH2P05091 517 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 CTSAP10619 480 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 COASYQ13057 564 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 KARSQ15046 597 aaKnown RBP16.79■□□□□ 0.28
C9orf50-202ENST00000619117 TMEM184AQ6ZMB5 413 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 TAS1R3Q7RTX0 852 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 APBB1IPQ7Z5R6 666 aaPredicted RBP16.79■□□□□ 0.28
C9orf50-202ENST00000619117 FAM178BQ8IXR5 827 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 SMRP1Q8NCR6 262 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 RPS6KC1Q96S38 1066 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 BLOC1S4Q9NUP1 217 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 MARCH5Q9NX47 278 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 MIOSQ9NXC5 875 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 PARP2Q9UGN5 583 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 KCNG1Q9UIX4 513 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 ODF2LQ9ULJ1 636 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
C9orf50-202ENST00000619117 FAN1Q9Y2M0 1017 aa16.79■□□□□ 0.28
C9orf50-202ENST00000619117 TCF20Q9UGU0 1960 aaKnown RBP16.78■□□□□ 0.28
C9orf50-202ENST00000619117 MBTPS2O43462 519 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 RECQL4O94761 1208 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
C9orf50-202ENST00000619117 MARCKSP29966 332 aaPredicted RBP16.78■□□□□ 0.28
C9orf50-202ENST00000619117 RAD51AP2Q09MP3 1159 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 GIT2Q14161 759 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 SMAD2Q15796 467 aaKnown RBP16.78■□□□□ 0.28
C9orf50-202ENST00000619117 CLUL1Q15846 466 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 ARSHQ5FYA8 562 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 GPBP1Q86WP2 473 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 RAD54LQ92698 747 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 KCNN1Q92952 543 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 ACO2Q99798 780 aaKnown RBP16.78■□□□□ 0.28
C9orf50-202ENST00000619117 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
C9orf50-202ENST00000619117 SNTG2Q9NY99 539 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 KLK14Q9P0G3 267 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
C9orf50-202ENST00000619117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.77■□□□□ 0.28
C9orf50-202ENST00000619117 SFI1A8K8P3 1242 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 SLC16A4O15374 487 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 NR1I2O75469 434 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 CXCL14O95715 111 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 SRGAP2BP0DMP2 458 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 OR1G1P47890 313 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
C9orf50-202ENST00000619117 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.28
C9orf50-202ENST00000619117 SLC39A14Q15043 492 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 TMEM161BQ8NDZ6 487 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 LARP4BQ92615 738 aaKnown RBP16.77■□□□□ 0.28
C9orf50-202ENST00000619117 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 CDT1Q9H211 546 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 PTPRHQ9HD43 1115 aa16.77■□□□□ 0.28
C9orf50-202ENST00000619117 LARSQ9P2J5 1176 aaKnown RBP16.77■□□□□ 0.28
C9orf50-202ENST00000619117 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.28
C9orf50-202ENST00000619117 NPHP3-ACAD11A0A0J9YXS1 232 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 H0YCG3 227 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 PTGESO14684 152 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 BRD1O95696 1058 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 EFEMP2O95967 443 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 HSP90AA1P07900 732 aaKnown RBP16.76■□□□□ 0.27
C9orf50-202ENST00000619117 MAPTP10636 758 aaKnown RBP16.76■□□□□ 0.27
C9orf50-202ENST00000619117 PROZP22891 400 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 ZNF131P52739 623 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 SMTNP53814 917 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 CEBPZQ03701 1054 aaKnown RBP16.76■□□□□ 0.27
C9orf50-202ENST00000619117 MCM6Q14566 821 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 PTPN14Q15678 1187 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 ZNF568Q3ZCX4 644 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 SPECC1Q5M775 1068 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 USP49Q70CQ1 688 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 RNF168Q8IYW5 571 aaPredicted RBP16.76■□□□□ 0.27
C9orf50-202ENST00000619117 AUTS2Q8WXX7 1259 aa16.76■□□□□ 0.27
C9orf50-202ENST00000619117 EPSTI1Q96J88 318 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms