RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PCDHGC5Q9Y5F6 944 aa18.77■□□□□ 0.59
PCDHGC3-205ENST00000617641 FAM170AA1A519 330 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 TMCO5BA8MYB1 307 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 H2AFZP0C0S5 128 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 RHOXF2BP0C7M4 288 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 SCP2P22307 547 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 CXCR5P32302 372 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 GTF2H1P32780 548 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 GCLCP48506 637 aaPredicted RBP18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 WNT7BP56706 349 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 SPRYD7Q5W111 196 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 LMBRD2Q68DH5 695 aaPredicted RBP18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 H2AFVQ71UI9 128 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 FBXL13Q8NEE6 735 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 SLC20A1Q8WUM9 679 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 OSBPL9Q96SU4 736 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 RHOXF2Q9BQY4 288 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 TMEM134Q9H6X4 195 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 ARGLU1Q9NWB6 273 aaPredicted RBP18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 MORF4L1Q9UBU8 362 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 PPME1Q9Y570 386 aa18.76■□□□□ 0.59
PCDHGC3-205ENST00000617641 GRID2IPA4D2P6 1211 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 USP8P40818 1118 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 MATR3P43243 847 aaKnown RBP eCLIP18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 GPC3P51654 580 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 CKAP4Q07065 602 aaKnown RBP18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 ZBTB41Q5SVQ8 909 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 IER5Q5VY09 327 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 TAPT1Q6NXT6 567 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 CREG2Q8IUH2 290 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 PTPN18Q99952 460 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 SMARCAD1Q9H4L7 1026 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 KIAA1586Q9HCI6 787 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 SEPT11Q9NVA2 429 aaKnown RBP18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 RAB20Q9NX57 234 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 TRPC6Q9Y210 931 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 IVNS1ABPQ9Y6Y0 642 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 TTLL13PA6NNM8 815 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 PRLRP16471 622 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 ARHGAP1Q07960 439 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 CRELD2Q6UXH1 353 aaPredicted RBP18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 ILDR2Q71H61 639 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 PALB2Q86YC2 1186 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 ZNF516Q92618 1163 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 ZBTB10Q96DT7 871 aa18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 CCDC94Q9BW85 323 aaPredicted RBP18.75■□□□□ 0.59
PCDHGC3-205ENST00000617641 SRGAP2CP0DJJ0 459 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 TNFAIP3P21580 790 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 NOP2P46087 812 aaKnown RBP18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 GALCP54803 685 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 LAMTOR4Q0VGL1 99 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 PSMD6Q15008 389 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 SLFN12LQ6IEE8 588 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 HELQQ8TDG4 1101 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 PNKPQ96T60 521 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 MSTO1Q9BUK6 570 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 ATP8B3O60423 1300 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 TCP1P17987 556 aaKnown RBP18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 TUBB4BP68371 445 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 ENPEPQ07075 957 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 MSANTD4Q8NCY6 345 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 TCP11Q8WWU5 503 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 NT5C1BQ96P26 610 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 AGPAT1Q99943 283 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 PI4K2AQ9BTU6 479 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 PDE11AQ9HCR9 933 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 TAS2R14Q9NYV8 317 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 INTUQ9ULD6 942 aa18.74■□□□□ 0.59
PCDHGC3-205ENST00000617641 A0A0B4J269 797 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 KIAA0391O15091 583 aaKnown RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 STRNO43815 780 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 HARSP12081 509 aaKnown RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 DNA2P51530 1060 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 MFAP3P55082 362 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 MAMDC4Q6UXC1 1216 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 GPR142Q7Z601 462 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 ABRAQ8N0Z2 381 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 RNF149Q8NC42 400 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 TATDN2Q93075 761 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 FNBP1Q96RU3 617 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 GOLPH3Q9H4A6 298 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 PACSIN2Q9UNF0 486 aaPredicted RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 PTPRJQ12913 1337 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 GAS2O43903 313 aaKnown RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 SEC31AO94979 1220 aaKnown RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 SGPL1O95470 568 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 GJB1P08034 283 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 TNNI1P19237 187 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 SLC26A2P50443 739 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 SEZ6Q53EL9 994 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 MEI1Q5TIA1 1274 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 C15orf39Q6ZRI6 1047 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 FAM71AQ8IYT1 594 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 SHC3Q92529 594 aa18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 ZNF668Q96K58 619 aaPredicted RBP18.73■□□□□ 0.59
PCDHGC3-205ENST00000617641 CCDC113Q9H0I3 377 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms