RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TAS1R1Q7RTX1 841 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 DENND4AQ7Z401 1863 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 KSR1Q8IVT5 923 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 SDR16C5Q8N3Y7 309 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 GPR152Q8TDT2 470 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 SMG7Q92540 1137 aaKnown RBP9.52□□□□□ -0.89
GPC6-202ENST00000617456 STAMQ92783 540 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 PGBD4Q96DM1 585 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 FAM210AQ96ND0 272 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 PHF20Q9BVI0 1012 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 TRAIPQ9BWF2 469 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 SLKQ9H2G2 1235 aaPredicted RBP9.52□□□□□ -0.89
GPC6-202ENST00000617456 UNC45AQ9H3U1 944 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 WDR6Q9NNW5 1121 aaKnown RBP9.52□□□□□ -0.89
GPC6-202ENST00000617456 SUCLA2Q9P2R7 463 aaPredicted RBP9.52□□□□□ -0.89
GPC6-202ENST00000617456 FAN1Q9Y2M0 1017 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 PCDHB2Q9Y5E7 798 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 CLUHO75153 1309 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 C2orf16Q68DN1 1984 aa9.52□□□□□ -0.89
GPC6-202ENST00000617456 ACACBO00763 2458 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 IGKV6-21A0A0C4DH24 114 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 NRP1O14786 923 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 TEX28O15482 410 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 LILRB3O75022 631 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 RFPL2O75678 378 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 GLUD1P00367 558 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 ALDH2P05091 517 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 ADH1AP07327 375 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 SRFP11831 508 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 OR1G1P47890 313 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 RAB27AP51159 221 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 SCRN1Q12765 414 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 PPP2R5CQ13362 524 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 MYBPC2Q14324 1141 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 PCBP1Q15365 356 aaKnown RBP eCLIP9.51□□□□□ -0.89
GPC6-202ENST00000617456 ZC3H14Q6PJT7 736 aaKnown RBP9.51□□□□□ -0.89
GPC6-202ENST00000617456 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 GET4Q7L5D6 327 aaPredicted RBP9.51□□□□□ -0.89
GPC6-202ENST00000617456 MIER3Q7Z3K6 550 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 ETNPPLQ8TBG4 499 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 RUBCNQ92622 972 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 MYCBPQ99417 103 aaPredicted RBP9.51□□□□□ -0.89
GPC6-202ENST00000617456 INO80BQ9C086 356 aaPredicted RBP9.51□□□□□ -0.89
GPC6-202ENST00000617456 RSAD1Q9HA92 442 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 KCNMB3Q9NPA1 279 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 ARHGEF3Q9NR81 526 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 SIT1Q9Y3P8 196 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 CACNA1GO43497 2377 aa9.51□□□□□ -0.89
GPC6-202ENST00000617456 FRYLO94915 3013 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 CCDC194A0A1B0GVG4 234 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 POTEMA6NI47 508 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 KIF1CO43896 1103 aaKnown RBP9.5□□□□□ -0.89
GPC6-202ENST00000617456 GAS2O43903 313 aaKnown RBP9.5□□□□□ -0.89
GPC6-202ENST00000617456 ZNF623O75123 536 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 LRRN2O75325 713 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 MAFO75444 373 aaPredicted RBP9.5□□□□□ -0.89
GPC6-202ENST00000617456 KRT37O76014 449 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 SOD2P04179 222 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 CALRP27797 417 aaKnown RBP9.5□□□□□ -0.89
GPC6-202ENST00000617456 PSMC5P62195 406 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
GPC6-202ENST00000617456 PLA2G4FQ68DD2 849 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 ELMSAN1Q6PJG2 1045 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 DCLRE1AQ6PJP8 1040 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 NEK8Q86SG6 692 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 ZNF410Q86VK4 478 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 PALB2Q86YC2 1186 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 GLYCTKQ8IVS8 523 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 C1orf210Q8IVY1 113 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 SLFN12Q8IYM2 578 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 CMASQ8NFW8 434 aaPredicted RBP9.5□□□□□ -0.89
GPC6-202ENST00000617456 ITFG2Q969R8 447 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 RPS6KC1Q96S38 1066 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 TMEM175Q9BSA9 504 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 HERC2P3Q9BVR0 1158 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 FOXQ1Q9C009 403 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 BRMS1Q9HCU9 246 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 EPS15L1Q9UBC2 864 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 STK39Q9UEW8 545 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 DDX25Q9UHL0 483 aaKnown RBP9.5□□□□□ -0.89
GPC6-202ENST00000617456 TPCN1Q9ULQ1 816 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 STK24Q9Y6E0 443 aa9.5□□□□□ -0.89
GPC6-202ENST00000617456 F8W810 466 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 STBD1O95210 358 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 P4HBP07237 508 aaKnown RBP9.49□□□□□ -0.89
GPC6-202ENST00000617456 SRGAP2CP0DJJ0 459 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 QARSP47897 775 aaKnown RBP9.49□□□□□ -0.89
GPC6-202ENST00000617456 GLUD2P49448 558 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.49□□□□□ -0.89
GPC6-202ENST00000617456 MRPL10Q7Z7H8 261 aaKnown RBP9.49□□□□□ -0.89
GPC6-202ENST00000617456 NXPE3Q969Y0 559 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 ZNF707Q96C28 371 aaPredicted RBP9.49□□□□□ -0.89
GPC6-202ENST00000617456 B3GALT6Q96L58 329 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
GPC6-202ENST00000617456 CEP89Q96ST8 783 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms