RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 I3L4J1 428 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 NEMP1O14524 444 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 PHBP35232 272 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 PSMC6P62333 389 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 C2CD6Q53TS8 623 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 NXNQ6DKJ4 435 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 KDELC2Q7Z4H8 507 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 ZNF564Q8TBZ8 553 aaPredicted RBP10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 CPA5Q8WXQ8 436 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 TBXAS1P24557 533 aaPredicted RBP10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 CPT1AP50416 773 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 MTM1Q13496 603 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 COL9A3Q14050 684 aaPredicted RBP10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 PKN1Q16512 942 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 FYB2Q5VWT5 728 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 GJB7Q6PEY0 223 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 ELMO3Q96BJ8 720 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 SENP7Q9BQF6 1050 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 RNF208Q9H0X6 261 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 PXMP2Q9NR77 195 aa10.82□□□□□ -0.68
SMARCA1-205ENST00000617310 ZBTB39O15060 712 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 HLA-DRAP01903 254 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 CDC25BP30305 580 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 SREBF1P36956 1147 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 BEX3Q00994 111 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 VEPH1Q14D04 833 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ZKSCAN8Q15776 578 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 RNF219Q5W0B1 726 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 CBWD2Q8IUF1 395 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 RHOT2Q8IXI1 618 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 GTF3C2Q8WUA4 911 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 DPF3Q92784 378 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 P3H4Q92791 437 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 RIOX1Q9H6W3 641 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 HDAC6Q9UBN7 1215 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 FHOD1Q9Y613 1164 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ASTN2O75129 1339 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ESYT3A0FGR9 886 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 CXCL11O14625 94 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 RHOBTB3O94955 611 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ACSL3O95573 720 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 RECQLP46063 649 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 FMO5P49326 533 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 KLK7P49862 253 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 RBP5P82980 135 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 GRB10Q13322 594 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 RPS6KA2Q15349 733 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 MGAT5BQ3V5L5 792 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 BTBD8Q5XKL5 378 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 DHX40Q8IX18 779 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 FAM163AQ96GL9 167 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ZNF512Q96ME7 567 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 C7orf25Q9BPX7 421 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 CBWD1Q9BRT8 395 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 MTIF3Q9H2K0 278 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 STARD7Q9NQZ5 370 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 STAP1Q9ULZ2 295 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 FIS1Q9Y3D6 152 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 A0A087WZ62 844 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 PRRG1O14668 218 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 SRGAP2BP0DMP2 458 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ADCYAP1R1P41586 468 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ZC3H18Q86VM9 953 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 COPS5Q92905 334 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 CABS1Q96KC9 395 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 FDXACB1Q9BRP7 624 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 PRMT7Q9NVM4 692 aaPredicted RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 CLGNO14967 610 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 INSRRP14616 1297 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 SMARCA1P28370 1054 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 FXR1P51114 621 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 NOP14P78316 857 aaKnown RBP10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ANKRD20A3Q5VUR7 823 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 NFRKBQ6P4R8 1299 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 ELMOD1Q8N336 334 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 CDKL2Q92772 493 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 SALL1Q9NSC2 1324 aa10.81□□□□□ -0.68
SMARCA1-205ENST00000617310 GON4LQ3T8J9 2241 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 C17orf102A2RUQ5 167 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 FAM86B1E9PN63 330 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 TRAPPC3O43617 180 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 FAM86B2P0C5J1 330 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 BCAR1P56945 870 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 LRRC31Q6UY01 552 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 SPATA2LQ8IUW3 424 aaPredicted RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 APPL2Q8NEU8 664 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 ALKBH8Q96BT7 664 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 TNIP3Q96KP6 325 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 DDX47Q9H0S4 455 aaKnown RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 GOLPH3Q9H4A6 298 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 USP27XA6NNY8 438 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 ITGB3P05106 788 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 SUPT20HL2P0C7V6 817 aa10.8□□□□□ -0.68
SMARCA1-205ENST00000617310 FXR2P51116 673 aaKnown RBP eCLIP10.8□□□□□ -0.681e-7■■■□□ 14.9
SMARCA1-205ENST00000617310 CDH6P55285 790 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms