RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 FBXO2Q9UK22 296 aaPredicted RBP18.78■□□□□ 0.6
ATXN2-227ENST00000616825 TRIM33Q9UPN9 1127 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 TNS3Q68CZ2 1445 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 SPAG7O75391 227 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 AP1B1Q10567 949 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 RNF168Q8IYW5 571 aaPredicted RBP18.78■□□□□ 0.6
ATXN2-227ENST00000616825 ZBED8Q8IZ13 594 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 TRIM54Q9BYV2 358 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 HACD3Q9P035 362 aa18.78■□□□□ 0.6
ATXN2-227ENST00000616825 STK25O00506 426 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 TBX3O15119 743 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 ESRRBO95718 433 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 MXD4Q14582 209 aaPredicted RBP18.77■□□□□ 0.6
ATXN2-227ENST00000616825 TRIML2Q8N7C3 387 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 AGPAT1Q99943 283 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.77■□□□□ 0.6
ATXN2-227ENST00000616825 CNOT7Q9UIV1 285 aaKnown RBP18.77■□□□□ 0.6
ATXN2-227ENST00000616825 C19orf81C9J6K1 198 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 NR3C2P08235 984 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 SETSIPP0DME0 302 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 CHRNA5P30532 468 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 MTMR2Q13614 643 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 LIMA1Q9UHB6 759 aaKnown RBP18.77■□□□□ 0.6
ATXN2-227ENST00000616825 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.6
ATXN2-227ENST00000616825 CYP26A1O43174 497 aa18.77■□□□□ 0.59
ATXN2-227ENST00000616825 TMCC1O94876 653 aa18.77■□□□□ 0.59
ATXN2-227ENST00000616825 SZRD1Q7Z422 152 aa18.77■□□□□ 0.59
ATXN2-227ENST00000616825 EPAS1Q99814 870 aa18.77■□□□□ 0.59
ATXN2-227ENST00000616825 FRMD3A2A2Y4 597 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 DHX34Q14147 1143 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ACCSLQ4AC99 568 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ZBTB41Q5SVQ8 909 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 IZUMO3Q5VZ72 239 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 NUDCD3Q8IVD9 361 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 RNPC3Q96LT9 517 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 LRRC37BQ96QE4 947 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 HAUS5O94927 633 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ZNF235Q14590 738 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 LMBRD2Q68DH5 695 aaPredicted RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 METTL16Q86W50 562 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 SPATA4Q8NEY3 305 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 EGFL8Q99944 293 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 MLXIPLQ9NP71 852 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 MRPL40Q9NQ50 206 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 DCTN4Q9UJW0 460 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 AGAP1Q9UPQ3 857 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ZNF197O14709 1029 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ZNF189O75820 626 aaPredicted RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ANP32DO95626 131 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 GGCXP38435 758 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 PPP2R2AP63151 447 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 TMEM259Q4ZIN3 620 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ZC3H18Q86VM9 953 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 USP31Q70CQ4 1352 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 FLT1P17948 1338 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 RALAP11233 206 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 RBP5P82980 135 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 CAPRIN1Q14444 709 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 STILQ15468 1287 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 IGDCC4Q8TDY8 1250 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 C1orf54Q8WWF1 131 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 SNF8Q96H20 258 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 SH2D3AQ9BRG2 576 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 HDAC6Q9UBN7 1215 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ZNF212Q9UDV6 495 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 PIN4Q9Y237 131 aaKnown RBP18.76■□□□□ 0.59
ATXN2-227ENST00000616825 ZDHHC9Q9Y397 364 aa18.76■□□□□ 0.59
ATXN2-227ENST00000616825 GMNCA6NCL1 334 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 DIAPH2O60879 1101 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 FOXD4Q12950 439 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-227ENST00000616825 MICALL2Q8IY33 904 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 CRB1P82279 1406 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 PPP1R12AO14974 1030 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-227ENST00000616825 RTN2O75298 545 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 RARBP10826 455 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 SLC1A1P43005 524 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 PTK2BQ14289 1009 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 PRR5LQ6MZQ0 368 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 ATL2Q8NHH9 583 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 RMDN2Q96LZ7 410 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 MYCBPQ99417 103 aaPredicted RBP18.75■□□□□ 0.59
ATXN2-227ENST00000616825 NOP53Q9NZM5 478 aaKnown RBP18.75■□□□□ 0.59
ATXN2-227ENST00000616825 SNX9Q9Y5X1 595 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 LMNAP02545 664 aaKnown RBP18.75■□□□□ 0.59
ATXN2-227ENST00000616825 ARFIP2P53365 341 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 ADSSL1Q8N142 457 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 SMARCAD1Q9H4L7 1026 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 ZFATQ9P243 1243 aa18.75■□□□□ 0.59
ATXN2-227ENST00000616825 SETD1BQ9UPS6 1966 aaKnown RBP18.75■□□□□ 0.59
ATXN2-227ENST00000616825 NBPF9Q3BBW0 867 aa18.74■□□□□ 0.59
ATXN2-227ENST00000616825 ZNF34Q8IZ26 560 aa18.74■□□□□ 0.59
ATXN2-227ENST00000616825 RMDN1Q96DB5 314 aa18.74■□□□□ 0.59
ATXN2-227ENST00000616825 SLC13A1Q9BZW2 595 aa18.74■□□□□ 0.59
ATXN2-227ENST00000616825 TJP2Q9UDY2 1190 aa18.74■□□□□ 0.59
ATXN2-227ENST00000616825 ZFP69BQ9UJL9 534 aa18.74■□□□□ 0.59
ATXN2-227ENST00000616825 UBA6A0AVT1 1052 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms