RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 FAM160A1Q05DH4 1040 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 CYTH1Q15438 398 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 LIN52Q52LA3 116 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
NOP56-220ENST00000616692 TRIML2Q8N7C3 387 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 GFM2Q969S9 779 aaKnown RBP16.4■□□□□ 0.22
NOP56-220ENST00000616692 KRT82Q9NSB4 513 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 LARSQ9P2J5 1176 aaKnown RBP16.4■□□□□ 0.22
NOP56-220ENST00000616692 LIMCH1Q9UPQ0 1083 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 CIAO1O76071 339 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 CHGBP05060 677 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 BTF3P20290 206 aaKnown RBP16.4■□□□□ 0.22
NOP56-220ENST00000616692 SERPINB6P35237 376 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 FXR1P51114 621 aaKnown RBP eCLIP16.4■□□□□ 0.22
NOP56-220ENST00000616692 EMP3P54852 163 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 HLTFQ14527 1009 aaKnown RBP eCLIP16.4■□□□□ 0.22
NOP56-220ENST00000616692 NXNQ6DKJ4 435 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 LRRC8BQ6P9F7 803 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 SLC4A10Q6U841 1118 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 TRIM67Q6ZTA4 783 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.4■□□□□ 0.227e-6■□□□□ 9
NOP56-220ENST00000616692 GLMNQ92990 594 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 ZIM3Q96PE6 472 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 PPP1R10Q96QC0 940 aaKnown RBP16.4■□□□□ 0.22
NOP56-220ENST00000616692 KLHL4Q9C0H6 718 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 RNPEPL1Q9HAU8 725 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 TBK1Q9UHD2 729 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 MOSPD1Q9UJG1 213 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 SNX9Q9Y5X1 595 aa16.4■□□□□ 0.22
NOP56-220ENST00000616692 RASA4BC9J798 803 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 KMOO15229 486 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 RASA4O43374 803 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 TMCC2O75069 709 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 CHRNB1P11230 501 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 VAV1P15498 845 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 CALB2P22676 271 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 B2MP61769 119 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 BRSK2Q8IWQ3 736 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 ANKS4BQ8N8V4 417 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 TSEN2Q8NCE0 465 aaKnown RBP16.39■□□□□ 0.21
NOP56-220ENST00000616692 NAT14Q8WUY8 206 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 ZFPM2Q8WW38 1151 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
NOP56-220ENST00000616692 AGAP1Q9UPQ3 857 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 EYA2O00167 538 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 CBFA2T3O75081 653 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 AP3M2P53677 418 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 NCALDP61601 193 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 DHX9Q08211 1270 aaKnown RBP16.39■□□□□ 0.21
NOP56-220ENST00000616692 DCTN2Q13561 401 aaKnown RBP16.39■□□□□ 0.21
NOP56-220ENST00000616692 DPYSQ14117 519 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 GRIK5Q16478 980 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 CDAN1Q8IWY9 1227 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
NOP56-220ENST00000616692 SDCCAG3Q96C92 435 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 SNF8Q96H20 258 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 TRIM47Q96LD4 638 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 OLFM3Q96PB7 478 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 SNX25Q9H3E2 840 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 TCF7L2Q9NQB0 619 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.39■□□□□ 0.21
NOP56-220ENST00000616692 NUMBLQ9Y6R0 609 aa16.39■□□□□ 0.21
NOP56-220ENST00000616692 KRT16P08779 473 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 LRRC24Q50LG9 513 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 RUBCNQ92622 972 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 MED30Q96HR3 178 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 ATP6V1G3Q96LB4 118 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 GOLGA8CPA6NN73 597 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 ZBED1O96006 694 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 PTPN2P17706 415 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 CCR3P51677 355 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 UBASH3AP57075 661 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 MAP3K10Q02779 954 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 LMNB2Q03252 620 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 RCN2Q14257 317 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 TOR1AIP2Q8NFQ8 470 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 ASAP3Q8TDY4 903 aa16.38■□□□□ 0.21
NOP56-220ENST00000616692 NKX1-2Q9UD57 310 aaPredicted RBP16.38■□□□□ 0.21
NOP56-220ENST00000616692 ANKRD34BA5PLL1 514 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 HAT1O14929 419 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
NOP56-220ENST00000616692 ENTPD3O75355 529 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 FASTKD5Q7L8L6 764 aaKnown RBP16.37■□□□□ 0.21
NOP56-220ENST00000616692 CPLX4Q7Z7G2 160 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 ZNF598Q86UK7 904 aaKnown RBP16.37■□□□□ 0.21
NOP56-220ENST00000616692 KIAA1958Q8N8K9 716 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 ZNF75CPQ92670 426 aaPredicted RBP16.37■□□□□ 0.21
NOP56-220ENST00000616692 HTATIP2Q9BUP3 242 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 FAM129AQ9BZQ8 928 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 DNAI2Q9GZS0 605 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 A0A1W2PPC1 479 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
NOP56-220ENST00000616692 GJB1P08034 283 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 CPA3P15088 417 aa16.37■□□□□ 0.21
NOP56-220ENST00000616692 BCAMP50895 628 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms