RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TMEM134Q9H6X4 195 aa12.53□□□□□ -0.4
SLIRP-212ENST00000613856 SUGCTQ9HAC7 445 aa12.53□□□□□ -0.4
SLIRP-212ENST00000613856 SETD4Q9NVD3 440 aa12.53□□□□□ -0.4
SLIRP-212ENST00000613856 HDAC6Q9UBN7 1215 aa12.53□□□□□ -0.4
SLIRP-212ENST00000613856 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
SLIRP-212ENST00000613856 TBX20Q9UMR3 447 aa12.53□□□□□ -0.4
SLIRP-212ENST00000613856 EXOC7Q9UPT5 735 aa12.53□□□□□ -0.4
SLIRP-212ENST00000613856 LRRIQ4A6NIV6 560 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 TGFB1I1O43294 461 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 PIGRP01833 764 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 RPLP2P05387 115 aaKnown RBP12.52□□□□□ -0.41
SLIRP-212ENST00000613856 EEF1GP26641 437 aaKnown RBP12.52□□□□□ -0.41
SLIRP-212ENST00000613856 CDC42EP1Q00587 391 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 PTPN11Q06124 597 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-212ENST00000613856 KCNA1Q09470 495 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 MYBPC2Q14324 1141 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 TAS1R3Q7RTX0 852 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 ZNF410Q86VK4 478 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 SLC9A9Q8IVB4 645 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 FAM114A1Q8IWE2 563 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 ZBTB8OSQ8IWT0 167 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-212ENST00000613856 CTAGE1Q96RT6 745 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
SLIRP-212ENST00000613856 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.41
SLIRP-212ENST00000613856 PFKMP08237 780 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 KCNA5P22460 613 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 RPL13P26373 211 aaKnown RBP12.51□□□□□ -0.41
SLIRP-212ENST00000613856 PTENP60484 403 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 WDR5P61964 334 aaKnown RBP12.51□□□□□ -0.41
SLIRP-212ENST00000613856 HIC1Q14526 733 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 TAF2Q6P1X5 1199 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 IRF2BP1Q8IU81 584 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 RHPN2Q8IUC4 686 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 RNF149Q8NC42 400 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 PHOX2BQ99453 314 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
SLIRP-212ENST00000613856 SEZ6LQ9BYH1 1024 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 UBE2ZQ9H832 354 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-212ENST00000613856 AGPAT3Q9NRZ7 376 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 AKT3Q9Y243 479 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 TRIOO75962 3097 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
SLIRP-212ENST00000613856 PRR33A8MZF0 331 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 CETN3O15182 167 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 SLC16A3O15427 465 aaKnown RBP12.5□□□□□ -0.41
SLIRP-212ENST00000613856 TREHO43280 583 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 AP5Z1O43299 807 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 GNA14O95837 355 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 NR3C1P04150 777 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 ATP1A3P13637 1013 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 NR2F2P24468 414 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 PHKA2P46019 1235 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 GPC3P51654 580 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
SLIRP-212ENST00000613856 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 FANCCQ00597 558 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 NHLH1Q02575 133 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 STRN3Q13033 797 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 FAM187BQ17R55 369 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 TCP11X2Q5H9J9 407 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 APTXQ7Z2E3 356 aaKnown RBP12.5□□□□□ -0.41
SLIRP-212ENST00000613856 FILIP1Q7Z7B0 1213 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 RPAINQ86UA6 219 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 KSR1Q8IVT5 923 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 GJD3Q8N144 294 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 NME8Q8N427 588 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 ANKRD20A12PQ8NF67 263 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 ANP32BQ92688 251 aaKnown RBP12.5□□□□□ -0.41
SLIRP-212ENST00000613856 NLRP4Q96MN2 994 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 MKNK1Q9BUB5 465 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 DMAC2Q9NW81 257 aa12.5□□□□□ -0.41
SLIRP-212ENST00000613856 LIMA1Q9UHB6 759 aaKnown RBP12.5□□□□□ -0.41
SLIRP-212ENST00000613856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-212ENST00000613856 LRRC10BA6NIK2 292 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 KCNJ18B7U540 433 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 K7ERI5 159 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 VTNP04004 478 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 SRGAP2CP0DJJ0 459 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 ACTN1P12814 892 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 MBTD1Q05BQ5 628 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 ADAM9Q13443 819 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 KCNJ12Q14500 433 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 MAPK6Q16659 721 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 GDF6Q6KF10 455 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-212ENST00000613856 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 RUFY4Q6ZNE9 571 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 SRGAP1Q7Z6B7 1085 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 SERINC5Q86VE9 423 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 PHOSPHO2Q8TCD6 241 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 DHX38Q92620 1227 aaKnown RBP12.49□□□□□ -0.41
SLIRP-212ENST00000613856 MRFAP1L1Q96HT8 127 aa12.49□□□□□ -0.41
SLIRP-212ENST00000613856 CNOT6LQ96LI5 555 aaKnown RBP12.49□□□□□ -0.41
SLIRP-212ENST00000613856 PRIMPOLQ96LW4 560 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms