RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 UBXN2AP68543 259 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 TRPM8Q7Z2W7 1104 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 CPNE8Q86YQ8 564 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 C12orf56Q8IXR9 622 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 FAM71AQ8IYT1 594 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ELAC2Q9BQ52 826 aaKnown RBP18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ZNF577Q9BSK1 485 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 PTPN22Q9Y2R2 807 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ATRNL1Q5VV63 1379 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ZNF646O15015 1829 aaPredicted RBP18.32■□□□□ 0.52
EWSR1-221ENST00000610553 G3V3G9 751 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 SGPL1O95470 568 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 POLR2MP0CAP2 368 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 SLC8A1P32418 973 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 RRP1BQ14684 758 aaKnown RBP18.32■□□□□ 0.52
EWSR1-221ENST00000610553 DCAF8Q5TAQ9 597 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 PODNQ7Z5L7 613 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 CEP57Q86XR8 500 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ZNF564Q8TBZ8 553 aaPredicted RBP18.32■□□□□ 0.52
EWSR1-221ENST00000610553 CBWD1Q9BRT8 395 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ROPN1BQ9BZX4 212 aaPredicted RBP18.32■□□□□ 0.52
EWSR1-221ENST00000610553 NSRP1Q9H0G5 558 aaKnown RBP18.32■□□□□ 0.52
EWSR1-221ENST00000610553 PCIF1Q9H4Z3 704 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 DBNDD1Q9H9R9 158 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ROPN1Q9HAT0 212 aaPredicted RBP18.32■□□□□ 0.52
EWSR1-221ENST00000610553 SYNPO2Q9UMS6 1093 aa18.32■□□□□ 0.52
EWSR1-221ENST00000610553 ATP6V1G2O95670 118 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 OAS1P00973 400 aaKnown RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 CYP1A2P05177 515 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 VIMP08670 466 aaKnown RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 VIL1P09327 827 aaKnown RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 ARP10275 920 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 IFNAR2P48551 515 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 TRAF1Q13077 416 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 HIBCHQ6NVY1 386 aaPredicted RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 TRMT10CQ7L0Y3 403 aaKnown RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 EXOC3L1Q86VI1 746 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 PLEKHO2Q8TD55 490 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 SLCO2A1Q92959 643 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 LRRC19Q9H756 370 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 TMEM206Q9H813 350 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 USP20Q9Y2K6 914 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 SCN9AQ15858 1988 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 ZNFX1Q9P2E3 1918 aaKnown RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 SPOPO43791 374 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 SNX3O60493 162 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 KCNJ1P48048 391 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 RBM5P52756 815 aaKnown RBP eCLIP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 ALCAMQ13740 583 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 PPP1R7Q15435 360 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 MIGA2Q7L4E1 593 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 BTBD6Q96KE9 485 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 NUP85Q9BW27 656 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 TEKT3Q9BXF9 490 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 CDC42EP4Q9H3Q1 356 aaKnown RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 AAASQ9NRG9 546 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 DBR1Q9UK59 544 aaKnown RBP18.31■□□□□ 0.52
EWSR1-221ENST00000610553 GTF3C4Q9UKN8 822 aa18.31■□□□□ 0.52
EWSR1-221ENST00000610553 PMM2O15305 246 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 ECEL1O95672 775 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 MAPTP10636 758 aaKnown RBP18.3■□□□□ 0.52
EWSR1-221ENST00000610553 PDE6CP51160 858 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 FMO1Q01740 532 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 CCDC38Q502W7 563 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
EWSR1-221ENST00000610553 PADI6Q6TGC4 694 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 GIMAP7Q8NHV1 300 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 KREMEN1Q96MU8 473 aa18.3■□□□□ 0.52
EWSR1-221ENST00000610553 LARSQ9P2J5 1176 aaKnown RBP18.3■□□□□ 0.52
EWSR1-221ENST00000610553 MXI1P50539 228 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.522e-12■■■□□ 15.4
EWSR1-221ENST00000610553 CALCOCO2Q13137 446 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 RNF207Q6ZRF8 634 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 SLC47A2Q86VL8 602 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 CCDC63Q8NA47 563 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 ZSWIM2Q8NEG5 633 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 DDX23Q9BUQ8 820 aaKnown RBP18.29■□□□□ 0.52
EWSR1-221ENST00000610553 TMEM117Q9H0C3 514 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 CCDC113Q9H0I3 377 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 ACP6Q9NPH0 428 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 HOMER3Q9NSC5 361 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 ABCF3Q9NUQ8 709 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 IPO5O00410 1097 aaKnown RBP18.29■□□□□ 0.52
EWSR1-221ENST00000610553 MAPK13O15264 365 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 EZRP15311 586 aaKnown RBP18.29■□□□□ 0.52
EWSR1-221ENST00000610553 ELF1P32519 619 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 RWDD2BP57060 319 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 RASA3Q14644 834 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 LONRF1Q17RB8 773 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 CCDC25Q86WR0 208 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 XXYLT1Q8NBI6 393 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 PSPC1Q8WXF1 523 aaKnown RBP18.29■□□□□ 0.52
EWSR1-221ENST00000610553 SHC3Q92529 594 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 NOD2Q9HC29 1040 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 HSPBP1Q9NZL4 362 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 WHRNQ9P202 907 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 UVRAGQ9P2Y5 699 aa18.29■□□□□ 0.52
EWSR1-221ENST00000610553 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
EWSR1-221ENST00000610553 CFAP73A6NFT4 308 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms