RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CCDC172P0C7W6 258 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 RARBP10826 455 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PRKCIP41743 596 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GPC3P51654 580 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 JAM2P57087 298 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KRT83P78385 493 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GOLGA8FQ08AF8 430 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GOLGA8DPQ0D2H9 430 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PRPF4BQ13523 1007 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SFMBT2Q5VUG0 894 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TAF2Q6P1X5 1199 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 C15orf39Q6ZRI6 1047 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SESTD1Q86VW0 696 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 BRSK2Q8IWQ3 736 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KIAA0319LQ8IZA0 1049 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 EHBP1Q8NDI1 1231 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PPP1R13BQ96KQ4 1090 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 EIF3CQ99613 913 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MTG1Q9BT17 334 aaPredicted RBP13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TARS2Q9BW92 718 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 INO80BQ9C086 356 aaPredicted RBP13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ADGRG1Q9Y653 693 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TRIP11Q15643 1979 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SOWAHDA6NJG2 315 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 LRRC53A6NM62 1247 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GPR25O00155 361 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NDUFA10O95299 355 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SRGAP2CP0DJJ0 459 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MCF2P10911 925 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 AXLP30530 894 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 VEGFBP49765 207 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 POLR2FP61218 127 aaKnown RBP13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PPP3CAQ08209 521 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CACNB2Q08289 660 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SLC9C1Q4G0N8 1177 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CBWD6Q4V339 395 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CBWD3Q5JTY5 395 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CBWD5Q5RIA9 395 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ATF7IP2Q5U623 682 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CRELD2Q6UXH1 353 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RAD9BQ6WBX8 426 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RRAGAQ7L523 313 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ENOSF1Q7L5Y1 443 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CCDC155Q8N6L0 562 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SAAL1Q96ER3 474 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FAM213AQ9BRX8 229 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 STK33Q9BYT3 514 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 INTS2Q9H0H0 1204 aaKnown RBP13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RBAK-RBAKDNI3L0D1 243 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 INO80B-WBP1J3KQ70 363 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 ADAMTS4O75173 837 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CABYRO75952 493 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 IL18RAPO95256 599 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FERP16591 822 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SLC9A1P19634 815 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 IGBP1P78318 339 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PTPN14Q15678 1187 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 AMHR2Q16671 573 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RPAINQ86UA6 219 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 WDR49Q8IV35 697 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 REXO1L1PQ8IX06 675 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RDH13Q8NBN7 331 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PCSK9Q8NBP7 692 aaKnown RBP13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SLAIN1Q8ND83 568 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FBXL13Q8NEE6 735 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 PLEKHO2Q8TD55 490 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FAXDC2Q96IV6 333 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 SEZ6LQ9BYH1 1024 aa13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GCOM2Q9BZD3 368 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 NHEJ1Q9H9Q4 299 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 LUC7LQ9NQ29 371 aaKnown RBP13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 RBAKQ9NYW8 714 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 A0A087WZ62 844 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 C17orf102A2RUQ5 167 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GOLGA8IPA6NC78 632 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 GOLGA8JA6NMD2 632 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 FKTNO75072 461 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 TRPA1O75762 1119 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 EDN1P05305 212 aa13.31□□□□□ -0.28
NEDD8-MDP1-203ENST00000604306 MYL3P08590 195 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms