RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 CAPRIN2Q6IMN6 1127 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 ZNF720Q7Z2F6 126 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 SLCO2A1Q92959 643 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 PARVGQ9HBI0 331 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 UBE2TQ9NPD8 197 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 CORO1CQ9ULV4 474 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 TTC4O95801 387 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 BCRP11274 1271 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 BFSP1Q12934 665 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 ECHDC2Q86YB7 292 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 ARHGEF19Q8IW93 802 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 ARMC2Q8NEN0 867 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 CYP2W1Q8TAV3 490 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 UTP4Q969X6 686 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 TRIM7Q9C029 511 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 UBE4BO95155 1302 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 KIF3CO14782 793 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 ATMINO43313 823 aaPredicted RBP16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 TCEA3O75764 348 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 UNC5CO95185 931 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 CHRNB2P17787 502 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 CIITAP33076 1130 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 ABL2P42684 1182 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 CCDC15Q0P6D6 951 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 MTFR1Q15390 333 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 CYP4X1Q8N118 509 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 BTBD6Q96KE9 485 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 MAGEB18Q96M61 343 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 HSD17B14Q9BPX1 270 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 KLHL14Q9P2G3 628 aa16.35■□□□□ 0.21
LYSMD4-211ENST00000604213 SPATA31A5Q5VU36 1347 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 SPATA31A6Q5VVP1 1343 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 SPATA31A7Q8IWB4 1347 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 ITIH2P19823 946 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 KRT17Q04695 432 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 ACVR2BQ13705 512 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 KCTD17Q8N5Z5 321 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 MICAL1Q8TDZ2 1067 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 ZBTB39O15060 712 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 SPOPO43791 374 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 DLATP10515 647 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 TAC1P20366 129 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 STX2P32856 288 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 KYNUQ16719 465 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 ZNF483Q8TF39 744 aaPredicted RBP16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 C1orf54Q8WWF1 131 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 LGALS13Q9UHV8 139 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
LYSMD4-211ENST00000604213 FSCN2O14926 492 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 HGSO14964 777 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 CLDN3O15551 220 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 SLITRK3O94933 977 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 SGPL1O95470 568 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 IVDP26440 423 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 FOXN2P32314 431 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 RWDD2BP57060 319 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 SNAP25P60880 206 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 DLG4P78352 724 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 C11orf91Q3C1V1 193 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 RDH13Q8NBN7 331 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 ZNF564Q8TBZ8 553 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 KCNV2Q8TDN2 545 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 ANKRD27Q96NW4 1050 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 RAB3IPQ96QF0 476 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 NUP85Q9BW27 656 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 ETNK1Q9HBU6 452 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 SEL1LQ9UBV2 794 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 A6NHS1 94 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 GNPATO15228 680 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 RAD21O60216 631 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 EXOC3O60645 756 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 FOSP01100 380 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 CYP1A2P05177 515 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 CETPP11597 493 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 GNAZP19086 355 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 SEPT14Q6ZU15 432 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 TPH2Q8IWU9 490 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 FAM178BQ8IXR5 827 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 VTI1AQ96AJ9 217 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 KIF9Q9HAQ2 790 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 TUFT1Q9NNX1 390 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 DNAJC17Q9NVM6 304 aaKnown RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 NINJ2Q9NZG7 142 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 NKX1-2Q9UD57 310 aaPredicted RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 ASIC3Q9UHC3 531 aa16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 NOCTQ9UK39 431 aaKnown RBP16.33■□□□□ 0.2
LYSMD4-211ENST00000604213 GREB1LQ9C091 1923 aaPredicted RBP16.32■□□□□ 0.2
LYSMD4-211ENST00000604213 LUC7L3O95232 432 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms