RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 INTUQ9ULD6 942 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 USP20Q9Y2K6 914 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 ZSCAN9O15535 394 aaPredicted RBP16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 ZBED4O75132 1171 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 SP100P23497 879 aaPredicted RBP16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 ADCY1Q08828 1119 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 MTA1Q13330 715 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 ANKRD40Q6AI12 368 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 OTUD6AQ7L8S5 288 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 HOOK3Q86VS8 718 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 ELOA2Q8IYF1 753 aaPredicted RBP16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 DAGLBQ8NCG7 672 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 BLOC1S4Q9NUP1 217 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 AMACRQ9UHK6 382 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 MRPL11Q9Y3B7 192 aaKnown RBP16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 CSADQ9Y600 493 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 FZD9O00144 591 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 PRLRP16471 622 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 DESP17661 470 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 SOX10P56693 466 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 AMPD3Q01432 767 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 ZNF365Q70YC5 407 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 SPATA20Q8TB22 786 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 DDX27Q96GQ7 796 aaKnown RBP16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 R3HDMLQ9H3Y0 253 aa16.46■□□□□ 0.23
PPFIA3-206ENST00000602655 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 SART1O43290 800 aaKnown RBP16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 ZNF189O75820 626 aaPredicted RBP16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 RARAP10276 462 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 PTPRAP18433 802 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 AGBL2Q5U5Z8 902 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 EMC10Q5UCC4 262 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 KLHDC7AQ5VTJ3 777 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 ANKRD35Q8N283 1001 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 WDR18Q9BV38 432 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.22
PPFIA3-206ENST00000602655 NAV1Q8NEY1 1877 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 TPD52L2O43399 206 aaKnown RBP16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 RPS6KA1Q15418 735 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 ZNF658Q5TYW1 1059 aaPredicted RBP16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 ILDR2Q71H61 639 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 UCMAQ8WVF2 138 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 SNRNP27Q8WVK2 155 aaKnown RBP16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 MTMR9Q96QG7 549 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 AZI2Q9H6S1 392 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 KRIT1O00522 736 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 TNFRSF8P28908 595 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 PDE6CP51160 858 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 KCNA1Q09470 495 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 ITIH4Q14624 930 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 RNF168Q8IYW5 571 aaPredicted RBP16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 GDAP1Q8TB36 358 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 VCX3BQ9H321 246 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 VCX3AQ9NNX9 186 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 LUC7LQ9NQ29 371 aaKnown RBP16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 ARHGAP20Q9P2F6 1191 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
PPFIA3-206ENST00000602655 TCP11X1B4DZS4 312 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 VGLL4Q14135 290 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 ZNF449Q6P9G9 518 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 RNF207Q6ZRF8 634 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 DAAM2Q86T65 1068 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 ISCUQ9H1K1 167 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 A0A1W2PQC6 194 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 GSTT1P30711 240 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 TMEM62Q0P6H9 643 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 INTS8Q75QN2 995 aaKnown RBP16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 CCNJLQ8IV13 435 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 ELMO3Q96BJ8 720 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 CNOT6LQ96LI5 555 aaKnown RBP16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 RAB3IPQ96QF0 476 aaPredicted RBP16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 MOV10L1Q9BXT6 1211 aaKnown RBP16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 TSKSQ9UJT2 592 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 USP15Q9Y4E8 981 aaPredicted RBP16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 GCNT3O95395 438 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 ZCCHC18P0CG32 403 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 BACE1P56817 501 aa16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 DDX50Q9BQ39 737 aaKnown RBP16.44■□□□□ 0.22
PPFIA3-206ENST00000602655 NPTXRO95502 500 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 PGK2P07205 417 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 EEF1GP26641 437 aaKnown RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 CNTN2Q02246 1040 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 MEA1Q16626 185 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 KIAA0753Q2KHM9 967 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 ZC2HC1CQ53FD0 456 aaPredicted RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 IRF2BP1Q8IU81 584 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 CELF4Q9BZC1 486 aaKnown RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 NEUROG2Q9H2A3 272 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 OCEL1Q9H607 264 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 LRRC4CQ9HCJ2 640 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 KLHL14Q9P2G3 628 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 PCDHB13Q9Y5F0 798 aa16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 IPO5O00410 1097 aaKnown RBP16.43■□□□□ 0.22
PPFIA3-206ENST00000602655 UBTFL6P0CB48 400 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms