RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 AKAP3O75969 853 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 HNRNPA1P09651 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
HCG18-241ENST00000602290 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
HCG18-241ENST00000602290 CLCN3P51790 818 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 NLRP11P59045 1033 aaKnown RBP13.19□□□□□ -0.3
HCG18-241ENST00000602290 HAND2P61296 217 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 RNASELQ05823 741 aaKnown RBP13.19□□□□□ -0.3
HCG18-241ENST00000602290 TRAF1Q13077 416 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 ZNF484Q5JVG2 852 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 CLEC17AQ6ZS10 378 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 MAP4K3Q8IVH8 894 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 GPR65Q8IYL9 337 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 ESR2Q92731 530 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 PIGSQ96S52 555 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 UBL7Q96S82 380 aaPredicted RBP13.19□□□□□ -0.3
HCG18-241ENST00000602290 RIOX1Q9H6W3 641 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 FNIP2Q9P278 1114 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 KCNH3Q9ULD8 1083 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 PIAS3Q9Y6X2 628 aa13.19□□□□□ -0.3
HCG18-241ENST00000602290 NFASCO94856 1347 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 UQCRHLA0A096LP55 91 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 CCDC163A0A0D9SF12 145 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 CYTH3O43739 400 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 UQCRHP07919 91 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 FGFR4P22455 802 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 DDIT3P35638 169 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 AFF1P51825 1210 aaKnown RBP13.18□□□□□ -0.3
HCG18-241ENST00000602290 PLK5Q496M5 336 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 ELSPBP1Q96BH3 223 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
HCG18-241ENST00000602290 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
HCG18-241ENST00000602290 FAM13BQ9NYF5 915 aa13.18□□□□□ -0.3
HCG18-241ENST00000602290 MYO9AB2RTY4 2548 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
HCG18-241ENST00000602290 PCNX2A6NKB5 2137 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 ARNTLO00327 626 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 MAFGO15525 162 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 ATP4AP20648 1035 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 NT5C2P49902 561 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 CCDC178Q5BJE1 867 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 TANGO2Q6ICL3 276 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 RAB44Q7Z6P3 723 aaPredicted RBP13.17□□□□□ -0.3
HCG18-241ENST00000602290 CCDC60Q8IWA6 550 aaPredicted RBP13.17□□□□□ -0.3
HCG18-241ENST00000602290 SLC39A7Q92504 469 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 CRELD1Q96HD1 420 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 MKNK1Q9BUB5 465 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 TMEM9BQ9NQ34 198 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 CHST12Q9NRB3 414 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
HCG18-241ENST00000602290 TMEM51Q9NW97 253 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 EML5Q05BV3 1969 aa13.17□□□□□ -0.3
HCG18-241ENST00000602290 BCLAF3A2AJT9 711 aaKnown RBP13.16□□□□□ -0.3
HCG18-241ENST00000602290 F8W810 466 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 J3QKU1 62 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 NRG2O14511 850 aaPredicted RBP13.16□□□□□ -0.3
HCG18-241ENST00000602290 ZNF623O75123 536 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 SEC24BO95487 1268 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 GPC3P51654 580 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 SRSF1Q07955 248 aaKnown RBP eCLIP13.16□□□□□ -0.33e-10■■■□□ 17.2
HCG18-241ENST00000602290 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
HCG18-241ENST00000602290 LRRC32Q14392 662 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 GRM2Q14416 872 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 AGMOQ6ZNB7 445 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 PI4K2BQ8TCG2 481 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 ING5Q8WYH8 240 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 SNX21Q969T3 373 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
HCG18-241ENST00000602290 BRD9Q9H8M2 597 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
HCG18-241ENST00000602290 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 GDE1Q9NZC3 331 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
HCG18-241ENST00000602290 PRG3Q9Y2Y8 225 aaPredicted RBP13.16□□□□□ -0.3
HCG18-241ENST00000602290 PNMA6FA0A0J9YX94 578 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 B4E1Z4 1266 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 H0Y626 953 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
HCG18-241ENST00000602290 CCL16O15467 120 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 TRIM16O95361 564 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 CCNE2O96020 404 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 ALDH2P05091 517 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 MLLT6P55198 1093 aaPredicted RBP13.15□□□□□ -0.3
HCG18-241ENST00000602290 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
HCG18-241ENST00000602290 SLC5A9Q2M3M2 681 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 ABHD15Q6UXT9 468 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 PIP4P1Q86T03 277 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 ZNF605Q86T29 641 aa13.15□□□□□ -0.3
HCG18-241ENST00000602290 COLGALT2Q8IYK4 626 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms