RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CCDC127Q96BQ5 260 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 TSEN34Q9BSV6 310 aaKnown RBP19.57■□□□□ 0.72
VRK3-225ENST00000601912 GINS2Q9Y248 185 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 TNFSF13BQ9Y275 285 aa19.57■□□□□ 0.72
VRK3-225ENST00000601912 CNTNAP2Q9UHC6 1331 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 TTLL13PA6NNM8 815 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 ESPNB1AK53 854 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 TULP1O00294 542 aaPredicted RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 B4GALT5O43286 388 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 RPLP2P05387 115 aaKnown RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 IQCF3P0C7M6 154 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 ACOT2P49753 483 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 NCBP1Q09161 790 aaKnown RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 NOLC1Q14978 699 aaKnown RBP eCLIP19.56■□□□□ 0.72
VRK3-225ENST00000601912 LHX8Q68G74 356 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 ZBTB33Q86T24 672 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 RSPH3Q86UC2 560 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 ARRDC4Q8NCT1 418 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 PARD3BQ8TEW8 1205 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 SH3TC2Q8TF17 1288 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 BAG1Q99933 345 aaPredicted RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 LSM14BQ9BX40 385 aaKnown RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 EDEM3Q9BZQ6 932 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 TTYH3Q9C0H2 523 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 HAPLN2Q9GZV7 340 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 OGTO15294 1046 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 P4HA2O15460 535 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 CSDE1O75534 798 aaKnown RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 HARSP12081 509 aaKnown RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 PROZP22891 400 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 ACLYP53396 1101 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 DLG4P78352 724 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 ZBED6P86452 979 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 CCZ1BP86790 482 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 CCZ1P86791 482 aaPredicted RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 MYL7Q01449 175 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 ZNF568Q3ZCX4 644 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 OR8K1Q8NGG5 319 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 FNBP1Q96RU3 617 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 NAA15Q9BXJ9 866 aaKnown RBP19.56■□□□□ 0.72
VRK3-225ENST00000601912 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.56■□□□□ 0.72
VRK3-225ENST00000601912 TMX1Q9H3N1 280 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 PTPRHQ9HD43 1115 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 GCNT4Q9P109 453 aa19.56■□□□□ 0.72
VRK3-225ENST00000601912 GTF2H1P32780 548 aa19.55■□□□□ 0.72
VRK3-225ENST00000601912 AMHR2Q16671 573 aa19.55■□□□□ 0.72
VRK3-225ENST00000601912 GDF6Q6KF10 455 aaPredicted RBP19.55■□□□□ 0.72
VRK3-225ENST00000601912 CACNA2D4Q7Z3S7 1137 aa19.55■□□□□ 0.72
VRK3-225ENST00000601912 GLT1D1Q96MS3 346 aa19.55■□□□□ 0.72
VRK3-225ENST00000601912 PLCB1Q9NQ66 1216 aa19.55■□□□□ 0.72
VRK3-225ENST00000601912 ABHD10Q9NUJ1 306 aa19.55■□□□□ 0.72
VRK3-225ENST00000601912 RBAKQ9NYW8 714 aaPredicted RBP19.55■□□□□ 0.72
VRK3-225ENST00000601912 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.55■□□□□ 0.72
VRK3-225ENST00000601912 TRIP12Q14669 1992 aaPredicted RBP19.54■□□□□ 0.72
VRK3-225ENST00000601912 M0QZ92 97 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 EIF4BP23588 611 aaKnown RBP19.54■□□□□ 0.72
VRK3-225ENST00000601912 PON1P27169 355 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 GCLMP48507 274 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 ITGA7Q13683 1181 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 PSMD6Q15008 389 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 SLC9C1Q4G0N8 1177 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 CBWD6Q4V339 395 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 CBWD3Q5JTY5 395 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 CBWD5Q5RIA9 395 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 CRELD2Q6UXH1 353 aaPredicted RBP19.54■□□□□ 0.72
VRK3-225ENST00000601912 PLEKHO2Q8TD55 490 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 OSMRQ99650 979 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 AGPAT5Q9NUQ2 364 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 CEP72Q9P209 647 aa19.54■□□□□ 0.72
VRK3-225ENST00000601912 LRRIQ3A6PVS8 624 aaPredicted RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 RNF225M0QZC1 329 aaPredicted RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 ABLIM1O14639 778 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 PMM2O15305 246 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 TSPAN1O60635 241 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 DLATP10515 647 aaKnown RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 DARSP14868 501 aaKnown RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 ARF4P18085 180 aaPredicted RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 SLC9A1P19634 815 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 MXI1P50539 228 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 CRYBB1P53674 252 aaPredicted RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 PTPN11Q06124 597 aaPredicted RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 PPP3CAQ08209 521 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 C1orf220Q5T0J3 134 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 CATSPER4Q7RTX7 472 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 APBB1IPQ7Z5R6 666 aaPredicted RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 DNAJC7Q99615 494 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 ADPGKQ9BRR6 497 aa19.53■□□□□ 0.72
VRK3-225ENST00000601912 ZNHIT6Q9NWK9 470 aaKnown RBP19.53■□□□□ 0.72
VRK3-225ENST00000601912 EPHB6O15197 1021 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 MCF2P10911 925 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 KYAT1Q16773 422 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 KRT39Q6A163 491 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 SERINC5Q86VE9 423 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 NUCKS1Q9H1E3 243 aaKnown RBP19.52■□□□□ 0.72
VRK3-225ENST00000601912 CDHR5Q9HBB8 845 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 TMEM8AQ9HCN3 771 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 PYCARDQ9ULZ3 195 aa19.52■□□□□ 0.72
VRK3-225ENST00000601912 A0A1B0GUA9 196 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 ARHGAP6O43182 974 aa19.52■□□□□ 0.71
VRK3-225ENST00000601912 NOL4O94818 638 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms