RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 RNF39Q9H2S5 420 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 XPNPEP1Q9NQW7 623 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MIOSQ9NXC5 875 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DDX25Q9UHL0 483 aaKnown RBP11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PCDHB2Q9Y5E7 798 aa11.3□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SPTLC1O15269 473 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DEXIO95424 95 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 POMCP01189 267 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MYBP10242 640 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 MTHFRP42898 656 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PSMC5P62195 406 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CES5AQ6NT32 575 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 GLB1LQ6UWU2 654 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 GPR149Q86SP6 731 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 TDRD5Q8NAT2 981 aaKnown RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PRPF31Q8WWY3 499 aaKnown RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NECTIN4Q96NY8 510 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 EIF2AQ9BY44 585 aaKnown RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CACNA2D2Q9NY47 1150 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 RGL1Q9NZL6 768 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NR2E1Q9Y466 385 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.29□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NRP1O14786 923 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NARSO43776 548 aaKnown RBP11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 LAMTOR4Q0VGL1 99 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 SCRN1Q12765 414 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 AMHR2Q16671 573 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 LARP1BQ659C4 914 aaKnown RBP11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 COLGALT2Q8IYK4 626 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ZNF274Q96GC6 653 aaPredicted RBP11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DYDC2Q96IM9 177 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 BBC3Q96PG8 261 aaPredicted RBP11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 RSAD1Q9HA92 442 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 CACNG4Q9UBN1 327 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 HES2Q9Y543 173 aa11.28□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 ACACAQ13085 2346 aa11.27□□□□□ -0.6
MIA-RAB4B-201ENST00000600729 A0A087WWV3 80 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 TSPAN1O60635 241 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 SRGAP2CP0DJJ0 459 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 QARSP47897 775 aaKnown RBP11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 RAB27AP51159 221 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 RNASELQ05823 741 aaKnown RBP11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CTTNQ14247 550 aaKnown RBP11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 EMC2Q15006 297 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 FERMT3Q86UX7 667 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CDR2LQ86X02 465 aaPredicted RBP11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 GSTCDQ8NEC7 633 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ASAP3Q8TDY4 903 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ZCCHC14Q8WYQ9 949 aaKnown RBP11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 TNFRSF25Q93038 417 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CPB2Q96IY4 423 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CEP170P1Q96L14 293 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 B3GALT6Q96L58 329 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ZFP42Q96MM3 310 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 LXNQ9BS40 222 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CXCL16Q9H2A7 254 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 SFXN1Q9H9B4 322 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 USTQ9Y2C2 406 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PRG3Q9Y2Y8 225 aaPredicted RBP11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 IPPQ9Y573 584 aa11.27□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 C2CD2LO14523 706 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 INPPL1O15357 1258 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 B4GALT5O43286 388 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 RFPL2O75678 378 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 LARGE1O95461 756 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 NCLP19338 710 aaKnown RBP11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PSMA5P28066 241 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 YWHABP31946 246 aaKnown RBP11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 MLH1P40692 756 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 DNM2P50570 870 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 DSC1Q08554 894 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 NR5A1Q13285 461 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 ATAT1Q5SQI0 421 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PIK3AP1Q6ZUJ8 805 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 SRGAP1Q7Z6B7 1085 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 NEK8Q86SG6 692 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 PDZD3Q86UT5 571 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 CABP7Q86V35 215 aa11.26□□□□□ -0.61
MIA-RAB4B-201ENST00000600729 C4orf19Q8IY42 314 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms