RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 GSTCDQ8NEC7 633 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 DEPTORQ8TB45 409 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 SNX29Q8TEQ0 813 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 ZFP42Q96MM3 310 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 KLHL5Q96PQ7 755 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 HERC2P3Q9BVR0 1158 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 APOL6Q9BWW8 343 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 CCDC113Q9H0I3 377 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 BHMT2Q9H2M3 363 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.39
VRK3-221ENST00000600284 MARCH5Q9NX47 278 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 DNM3Q9UQ16 869 aa17.46■□□□□ 0.39
VRK3-221ENST00000600284 PRKCBP05771 671 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 URODP06132 367 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 EPCAMP16422 314 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 AKAP5P24588 427 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 KLRC2P26717 231 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 GRIK3Q13003 919 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 ATAT1Q5SQI0 421 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 CABP7Q86V35 215 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 CDR2LQ86X02 465 aaPredicted RBP17.45■□□□□ 0.38
VRK3-221ENST00000600284 ADPGKQ9BRR6 497 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 APOL5Q9BWW9 433 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 PARP2Q9UGN5 583 aa17.45■□□□□ 0.38
VRK3-221ENST00000600284 PRG3Q9Y2Y8 225 aaPredicted RBP17.45■□□□□ 0.38
VRK3-221ENST00000600284 C1RP00736 705 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
VRK3-221ENST00000600284 GJB2P29033 226 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 PLA2G5P39877 138 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 CLCN4P51793 760 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 ZXDAP98168 799 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 KIAA1841Q6NSI8 718 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 BMP8AQ7Z5Y6 402 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 FAM122AQ96E09 287 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 MFSD14AQ96MC6 490 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 FBXL18Q96ME1 805 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 RPS6KC1Q96S38 1066 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 KCNH6Q9H252 994 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 PDZD7Q9H5P4 517 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 RXFP1Q9HBX9 757 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 DPP7Q9UHL4 492 aa17.44■□□□□ 0.38
VRK3-221ENST00000600284 H3BQV1 296 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 SSBP05455 408 aaKnown RBP eCLIP17.43■□□□□ 0.38
VRK3-221ENST00000600284 GLUD2P49448 558 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 ATP2C1P98194 919 aaPredicted RBP17.43■□□□□ 0.38
VRK3-221ENST00000600284 DSG1Q02413 1049 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 IL17AQ16552 155 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 TMEM132AQ24JP5 1023 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 RARS2Q5T160 578 aaKnown RBP17.43■□□□□ 0.38
VRK3-221ENST00000600284 KIAA0319Q5VV43 1072 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 TRIM67Q6ZTA4 783 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 POMKQ9H5K3 350 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 SFXN1Q9H9B4 322 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 CHST7Q9NS84 486 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
VRK3-221ENST00000600284 PHLPP2Q6ZVD8 1323 aa17.43■□□□□ 0.38
VRK3-221ENST00000600284 TTLL13PA6NNM8 815 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 K7ERI5 159 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
VRK3-221ENST00000600284 ADH1AP07327 375 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 DCAF4L1Q3SXM0 396 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 ARL6IP4Q66PJ3 421 aaKnown RBP17.42■□□□□ 0.38
VRK3-221ENST00000600284 ELMSAN1Q6PJG2 1045 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 TAS1R1Q7RTX1 841 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 APBB1IPQ7Z5R6 666 aaPredicted RBP17.42■□□□□ 0.38
VRK3-221ENST00000600284 TBC1D32Q96NH3 1257 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 TIPINQ9BVW5 301 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 C17orf75Q9HAS0 396 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.42■□□□□ 0.38
VRK3-221ENST00000600284 KLK14Q9P0G3 267 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 KCNG1Q9UIX4 513 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 ADAM28Q9UKQ2 775 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 USTQ9Y2C2 406 aa17.42■□□□□ 0.38
VRK3-221ENST00000600284 E9PMD0 336 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 THP07101 528 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 SIGLEC14Q08ET2 396 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 TUSC3Q13454 348 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 PTPN21Q16825 1174 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 USP41Q3LFD5 358 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 HYIQ5T013 277 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 FUT10Q6P4F1 479 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 CYP26C1Q6V0L0 522 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 C15orf39Q6ZRI6 1047 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 HFE2Q6ZVN8 426 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 GPR149Q86SP6 731 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 PLCD3Q8N3E9 789 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 C12orf76Q8N812 135 aaPredicted RBP17.41■□□□□ 0.38
VRK3-221ENST00000600284 CMASQ8NFW8 434 aaPredicted RBP17.41■□□□□ 0.38
VRK3-221ENST00000600284 HDAC7Q8WUI4 952 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 DRC1Q96MC2 740 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 MMTAG2Q9BU76 263 aaKnown RBP17.41■□□□□ 0.38
VRK3-221ENST00000600284 NT5C3AQ9H0P0 336 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 TMEM134Q9H6X4 195 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 SNTG2Q9NY99 539 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 FNIP2Q9P278 1114 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
VRK3-221ENST00000600284 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
VRK3-221ENST00000600284 TMEM221A6NGB7 291 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms