RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.68□□□□□ -0.7
VRK3-215ENST00000599138 PPP2R3CQ969Q6 453 aa10.68□□□□□ -0.7
VRK3-215ENST00000599138 CDCA3Q99618 268 aaPredicted RBP10.68□□□□□ -0.7
VRK3-215ENST00000599138 ACO2Q99798 780 aaKnown RBP10.68□□□□□ -0.7
VRK3-215ENST00000599138 VN1R3Q9BXE9 311 aa10.68□□□□□ -0.7
VRK3-215ENST00000599138 NGRNQ9NPE2 291 aaKnown RBP10.68□□□□□ -0.7
VRK3-215ENST00000599138 KMT5AQ9NQR1 393 aa10.68□□□□□ -0.7
VRK3-215ENST00000599138 CLDND1Q9NY35 253 aa10.68□□□□□ -0.7
VRK3-215ENST00000599138 ODF2LQ9ULJ1 636 aa10.68□□□□□ -0.7
VRK3-215ENST00000599138 TNFSF13BQ9Y275 285 aa10.68□□□□□ -0.7
VRK3-215ENST00000599138 CITO14578 2027 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 HIDE1A8MVS5 230 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 H3BQ06 376 aaPredicted RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 SLC16A4O15374 487 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 LINC01565O15544 149 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 CSPG5O95196 566 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 BRD1O95696 1058 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 GLP2RO95838 553 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 F13A1P00488 732 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 ALDH2P05091 517 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 HSP90AA1P07900 732 aaKnown RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 MAPTP10636 758 aaKnown RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 LIG1P18858 919 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 PROZP22891 400 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 NRIP1P48552 1158 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 SCNN1GP51170 649 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 DLX2Q07687 328 aaPredicted RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 PKP1Q13835 747 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 KCNC3Q14003 757 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 GIT2Q14161 759 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 DUSP6Q16828 381 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 DCAF4L1Q3SXM0 396 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 GPBP1Q86WP2 473 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 MICAL1Q8TDZ2 1067 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 ADAMTS19Q8TE59 1207 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 LARP4BQ92615 738 aaKnown RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 TMEM169Q96HH4 297 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 ZNF396Q96N95 335 aaPredicted RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 TCF25Q9BQ70 676 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 REEP2Q9BRK0 252 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 ADPGKQ9BRR6 497 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 APOL6Q9BWW8 343 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 MRPL4Q9BYD3 311 aaKnown RBP10.67□□□□□ -0.7
VRK3-215ENST00000599138 GBP3Q9H0R5 595 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 ZBP1Q9H171 429 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 TLE6Q9H808 572 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 MARCH5Q9NX47 278 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 SNTG2Q9NY99 539 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 CLEC1BQ9P126 229 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 IRAK3Q9Y616 596 aa10.67□□□□□ -0.7
VRK3-215ENST00000599138 FSD2A1L4K1 749 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 GRXCR2A6NFK2 248 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 C2orf71A6NGG8 1288 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 PTGESO14684 152 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 NRP1O14786 923 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 SPTLC2O15270 562 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 PPP6R2O75170 966 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 TBX10O75333 385 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 RECQL4O94761 1208 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 YEATS4O95619 227 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 CTSAP10619 480 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 SMTNP53814 917 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 NCKAP1LP55160 1127 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 GRIK3Q13003 919 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 STK38Q15208 465 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 NAB2Q15742 525 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 PUS10Q3MIT2 529 aaKnown RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 PLPP4Q5VZY2 271 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 TMEM184AQ6ZMB5 413 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 TMC7Q7Z402 723 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 RBM23Q86U06 439 aaKnown RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 RNF168Q8IYW5 571 aaPredicted RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 VPS52Q8N1B4 723 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 VN1R2Q8NFZ6 395 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 RASSF8Q8NHQ8 419 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 MSLNLQ96KJ4 702 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 FAM193BQ96PV7 902 aaPredicted RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 FIZ1Q96SL8 496 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 TARS2Q9BW92 718 aaKnown RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 CXCL16Q9H2A7 254 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 IGFLR1Q9H665 355 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 ENTPD7Q9NQZ7 604 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 KLK14Q9P0G3 267 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 LARSQ9P2J5 1176 aaKnown RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 TFIP11Q9UBB9 837 aaKnown RBP10.66□□□□□ -0.7
VRK3-215ENST00000599138 STK39Q9UEW8 545 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 CCDC39Q9UFE4 941 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 PARP2Q9UGN5 583 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 FAN1Q9Y2M0 1017 aa10.66□□□□□ -0.7
VRK3-215ENST00000599138 C5orf42Q9H799 3197 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 A0A087X0B3 334 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 H0YCG3 227 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 PER2O15055 1255 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 LILRB3O75022 631 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 MCF2P10911 925 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 SCP2P22307 547 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 COASYQ13057 564 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms