RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PRMT7Q9NVM4 692 aaPredicted RBP15.2■□□□□ 0.02
SCAF1-203ENST00000598359 MARCH5Q9NX47 278 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 KANSL3Q9P2N6 904 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 PARP2Q9UGN5 583 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 VWA3AA6NCI4 1184 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 WEE2P0C1S8 567 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 EPCAMP16422 314 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 MUTP22033 750 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 SP100P23497 879 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-203ENST00000598359 PRPHP41219 470 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 NAMPTP43490 491 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 ATP2C1P98194 919 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-203ENST00000598359 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
SCAF1-203ENST00000598359 PTPN14Q15678 1187 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 RILPL1Q5EBL4 403 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 LARP1BQ659C4 914 aaKnown RBP15.19■□□□□ 0.02
SCAF1-203ENST00000598359 RNF135Q8IUD6 432 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 DAW1Q8N136 415 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 GSTCDQ8NEC7 633 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 SUSD6Q92537 303 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 RPGRIP1Q96KN7 1286 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 TMEM175Q9BSA9 504 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 RUSC1Q9BVN2 902 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 C2orf40Q9H1Z8 148 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
SCAF1-203ENST00000598359 MUTYHQ9UIF7 546 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 DNM3Q9UQ16 869 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 GIT1Q9Y2X7 761 aa15.19■□□□□ 0.02
SCAF1-203ENST00000598359 FSD2A1L4K1 749 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 LAD1O00515 517 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 C2CD2LO14523 706 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 INPPL1O15357 1258 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 DCXO43602 365 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 SRGAP2BP0DMP2 458 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 DSC1Q08554 894 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 RAD51AP2Q09MP3 1159 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 MAPK6Q16659 721 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 FAM187BQ17R55 369 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 CASP10Q92851 521 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 SNX21Q969T3 373 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 B3GALT6Q96L58 329 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 IFT74Q96LB3 600 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 PRIMPOLQ96LW4 560 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 PNMA5Q96PV4 448 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 POP1Q99575 1024 aaKnown RBP15.18■□□□□ 0.02
SCAF1-203ENST00000598359 SNTG2Q9NY99 539 aa15.18■□□□□ 0.02
SCAF1-203ENST00000598359 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.18■□□□□ 0.02
SCAF1-203ENST00000598359 CCDC169A6NNP5 214 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 ACKR2O00590 384 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 N4BP3O15049 544 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 HIP1RO75146 1068 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 MYBP10242 640 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 PEX3P56589 373 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 BMS1Q14692 1282 aaKnown RBP15.17■□□□□ 0.02
SCAF1-203ENST00000598359 PPP2R5AQ15172 486 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 RARS2Q5T160 578 aaKnown RBP15.17■□□□□ 0.02
SCAF1-203ENST00000598359 NT5DC1Q5TFE4 455 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 SLC22A17Q8WUG5 538 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 KIFAP3Q92845 792 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 PAAF1Q9BRP4 392 aa15.17■□□□□ 0.02
SCAF1-203ENST00000598359 PHF7Q9BWX1 381 aaPredicted RBP15.17■□□□□ 0.02
SCAF1-203ENST00000598359 VPS37CA5D8V6 355 aaPredicted RBP15.16■□□□□ 0.02
SCAF1-203ENST00000598359 SFI1A8K8P3 1242 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 LOC730098B7Z3J9 87 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 RECQL4O94761 1208 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 CNPP09543 421 aaKnown RBP15.16■□□□□ 0.02
SCAF1-203ENST00000598359 NPTX2P47972 431 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 MAPK7Q13164 816 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 CUL4AQ13619 759 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 CBX2Q14781 532 aaPredicted RBP15.16■□□□□ 0.02
SCAF1-203ENST00000598359 RINT1Q6NUQ1 792 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 KLHL5Q96PQ7 755 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 RPS6KC1Q96S38 1066 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 FOXD4L1Q9NU39 408 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 GDAQ9Y2T3 454 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 IRAK3Q9Y616 596 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 STK24Q9Y6E0 443 aa15.16■□□□□ 0.02
SCAF1-203ENST00000598359 NPHP3-ACAD11A0A0J9YXS1 232 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 CARNS1A5YM72 827 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 CASTOR2A6NHX0 329 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 PTGESO14684 152 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 LILRB3O75022 631 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 SOD2P04179 222 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 HOXB8P17481 243 aaPredicted RBP15.15■□□□□ 0.02
SCAF1-203ENST00000598359 KLRC2P26717 231 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
SCAF1-203ENST00000598359 GRIN1Q05586 938 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 GRIK3Q13003 919 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 TPRNQ4KMQ1 711 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 ATF7IP2Q5U623 682 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 TAS1R3Q7RTX0 852 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 HASPINQ8TF76 798 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 HERC2P3Q9BVR0 1158 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 GPR62Q9BZJ7 368 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 POMKQ9H5K3 350 aa15.15■□□□□ 0.02
SCAF1-203ENST00000598359 MRPL17Q9NRX2 175 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms