RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 CFAP54Q96N23 3096 aa13.45□□□□□ -0.26
SOX2-OT-228ENST00000597828 CARNS1A5YM72 827 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 TTLL13PA6NNM8 815 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 INPPL1O15357 1258 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 TEX28O15482 410 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 N4BP1O75113 896 aaKnown RBP13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 RFPL2O75678 378 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 DGAT1O75907 488 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 LYPLA2O95372 231 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 EFEMP2O95967 443 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 SPATA31D3P0C874 917 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 AXLP30530 894 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 GLUD2P49448 558 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 TFDP1Q14186 410 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 SPATA31D4Q6ZUB0 917 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 CCDC149Q6ZUS6 474 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 UBALD2Q8IYN6 164 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 CNNM3Q8NE01 707 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 GSTCDQ8NEC7 633 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 MTMR9Q96QG7 549 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 RPS6KC1Q96S38 1066 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 PRRX2Q99811 253 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 CXCL16Q9H2A7 254 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 ANKEF1Q9NU02 776 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 KIF26AQ9ULI4 1882 aaPredicted RBP13.44□□□□□ -0.26
SOX2-OT-228ENST00000597828 TICRRQ7Z2Z1 1910 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 LRRIQ4A6NIV6 560 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 MED24O75448 989 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 EDN1P05305 212 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 SPATA31C1P0DKV0 1188 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 MCM7P33993 719 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 KIAA0319Q5VV43 1072 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 CWF19L1Q69YN2 538 aaKnown RBP13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 PAAF1Q9BRP4 392 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 GPR62Q9BZJ7 368 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 USP20Q9Y2K6 914 aa13.43□□□□□ -0.26
SOX2-OT-228ENST00000597828 NARSO43776 548 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 SEC24BO95487 1268 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 ADH1AP07327 375 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 RPL17P18621 184 aaKnown RBP13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 NEK4P51957 841 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 FUT10Q6P4F1 479 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 HASPINQ8TF76 798 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 RSAD2Q8WXG1 361 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 ATOH1Q92858 354 aaPredicted RBP13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 UBN1Q9NPG3 1134 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 GIT1Q9Y2X7 761 aa13.42□□□□□ -0.26
SOX2-OT-228ENST00000597828 CACNA1IQ9P0X4 2223 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 TSC2P49815 1807 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 CCDC195A0A1B0GUA6 201 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 GLUD1P00367 558 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 DSG1Q02413 1049 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 POU5F1BQ06416 359 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 GRIK3Q13003 919 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 TRIM29Q14134 588 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 SLC27A1Q6PCB7 646 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 PRSS55Q6UWB4 352 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 C15orf39Q6ZRI6 1047 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 OTOP3Q7RTS5 596 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 PALB2Q86YC2 1186 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 FLCNQ8NFG4 579 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 ACSF2Q96CM8 615 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 NFKBIZQ9BYH8 718 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 MFSD1Q9H3U5 465 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 RXFP1Q9HBX9 757 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 POLD4Q9HCU8 107 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 PARP2Q9UGN5 583 aa13.41□□□□□ -0.26
SOX2-OT-228ENST00000597828 CLUHO75153 1309 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 ZNF638Q14966 1978 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 COL4A2P08572 1712 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 A0A1B0GUA9 196 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 CASTOR2A6NHX0 329 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 GFRA3O60609 400 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 GBP2P32456 591 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 NCBP1Q09161 790 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 PCBP1Q15365 356 aaKnown RBP eCLIP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 CDCA2Q69YH5 1023 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 CCDC83Q8IWF9 413 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 CMASQ8NFW8 434 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 ZNF707Q96C28 371 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 MYADMQ96S97 322 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 KIFC3Q9BVG8 833 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 PDZD7Q9H5P4 517 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 KCNK12Q9HB15 430 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 CHST7Q9NS84 486 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms